Gene
| Gene Model ID | pfu_aug1.0_3328.1_30396 |
|---|---|
| Locus | scaffold3328.1 : 17175 ... 22835 : - |
| To GenomeBrowser | scaffold3328.1:17175..22835 |
| Genes list of scaffold | scaffold3328.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3328.1_30396.t1 | 2 | 1 | Ank_2 | 25 | 91 | 2.3e-24 | 85.5 | 1.4e-13 | 4.1e-10 | 39.8 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 1 | Ank | 31 | 57 | 3.3e-25 | 86.5 | 3.7e-07 | 0.0011 | 18.6 |
| pfu_aug1.0_3328.1_30396.t1 | 3 | 1 | Ank_4 | 31 | 80 | 3.4e-24 | 84.7 | 1.8e-09 | 5.4e-06 | 26.7 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 1 | Ank_3 | 31 | 55 | 1.8e-14 | 52.3 | 0.0036 | 11.0 | 6.6 |
| pfu_aug1.0_3328.1_30396.t1 | 3 | 1 | Ank_5 | 33 | 58 | 2.9e-18 | 65.4 | 8.7e-05 | 0.26 | 11.6 |
| pfu_aug1.0_3328.1_30396.t1 | 3 | 2 | Ank_5 | 59 | 100 | 2.9e-18 | 65.4 | 3.6e-09 | 1.1e-05 | 25.5 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 2 | Ank | 60 | 91 | 3.3e-25 | 86.5 | 3.7e-07 | 0.0011 | 18.6 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 2 | Ank_3 | 60 | 87 | 1.8e-14 | 52.3 | 0.00047 | 1.4 | 9.3 |
| pfu_aug1.0_3328.1_30396.t1 | 3 | 2 | Ank_4 | 78 | 114 | 3.4e-24 | 84.7 | 2.1e-09 | 6.2e-06 | 26.5 |
| pfu_aug1.0_3328.1_30396.t1 | 3 | 3 | Ank_5 | 80 | 133 | 2.9e-18 | 65.4 | 4.3e-13 | 1.3e-09 | 37.9 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 3 | Ank | 94 | 124 | 3.3e-25 | 86.5 | 5.3e-10 | 1.6e-06 | 27.6 |
| pfu_aug1.0_3328.1_30396.t1 | 3 | 3 | Ank_4 | 94 | 146 | 3.4e-24 | 84.7 | 6.1e-14 | 1.8e-10 | 41.0 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 3 | Ank_3 | 94 | 119 | 1.8e-14 | 52.3 | 5.4e-06 | 0.016 | 15.3 |
| pfu_aug1.0_3328.1_30396.t1 | 2 | 2 | Ank_2 | 97 | 155 | 2.3e-24 | 85.5 | 9.4e-15 | 2.8e-11 | 43.6 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 4 | Ank | 127 | 153 | 3.3e-25 | 86.5 | 1.2e-06 | 0.0035 | 17.0 |
| pfu_aug1.0_3328.1_30396.t1 | 4 | 4 | Ank_3 | 127 | 152 | 1.8e-14 | 52.3 | 4.3e-06 | 0.013 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3328.1_30396.t1 | gi|322702419|gb|EFY94070.1| | 3.0e-18 |
Transcript
| Transcript ID | pfu_aug1.0_3328.1_30396.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3328.1_30396.t1 atgcatattttcaaggatacgaaaaaaaatattccgttttcctggattatttgtacgaaaagtgaaggaatgaagaccaa atcgaagcagttattcattgctgtagaaaaaggacagtccagaaacgttgaggtccttttagaccagggtgtcagcgtca acataagggatgagacagatggttctacgcctctcatccgggcagccaaagggcgaaattacgtcatccagcaattactg cttacttatggtgctgatcctaaatcaaaagacgcagccggcctttctgcgcttcattacatagctgagaatggtgacgt agagagtctgaagctgttgttggcgcatggcgcgtccatggacgccaaggactcctcggggtgtacgccattacactata gcgtcgacagaagccgggtgtcaacaaccgatcttttagtattttgtggcgccgatgctaaattaatgaataagaggaat gttgcaccagctaaagttggaagacatcaaaagattcgctctttgctggaggactctgagaaagtcgtcgatggaataag aaataagtatgattatctatttccagtttga |
|
Protein
| Protein ID | pfu_aug1.0_3328.1_30396.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3328.1_30396.t1 MHIFKDTKKNIPFSWIICTKSEGMKTKSKQLFIAVEKGQSRNVEVLLDQGVSVNIRDETDGSTPLIRAAKGRNYVIQQLL LTYGADPKSKDAAGLSALHYIAENGDVESLKLLLAHGASMDAKDSSGCTPLHYSVDRSRVSTTDLLVFCGADAKLMNKRN VAPAKVGRHQKIRSLLEDSEKVVDGIRNKYDYLFPV |
|