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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_33345.1_12144
Locus scaffold33345.1 : 1 ... 6821 : -
To GenomeBrowser scaffold33345.1:1..6821
Genes list of scaffold scaffold33345.1
Synonym pfu_aug2.0_452.1_07544

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_33345.1_12144.t1 gi|270010395|gb|EFA06843.1| hypothetical protein TcasGA2_TC009786 [Tribolium castaneum] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1
maleGonad 1
mantle 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_33345.1_12144.t1
Definition-
>pfu_aug1.0_33345.1_12144.t1
agagatacagagcagatctcctgaacaagcaaataggagtttgtagtaaagtcattggtgagaaaatgaaggccaaagaa
ccacaaggagaggataagactgttcctgaaaacatcacaacaaatatagaaggatttactaaagaggacattcagtcctt
ggcagtcgtgcaaatcaaagagctgaaatccctgatagaacagcaaaaagttcagaatgctgccgacctggtcaaacatg
aaacagacaggaatgaagctctgaaggaagtggctaacttaacacacgagacgtgtataatcagtaacgatgaggatgaa
aatggtgtagaaaggacgtatggggactgtgaatctcgtaagaaatactcacacgtagacctggtggtgatggttgatgg
agttgaccttgaccgtgggtcggtgactgctggaggtcgtgggtattacttaaagggcccattggttttcatggaacagg
ctttaattaatctggcaatgaagatgttacatgacaggagttttgtccccttatatacaccattttttatgagaaaagaa
gtgatgcaggaagtcgctcagctctcacagtttgatgaagaattgtacaagaagcttgaccttgaggcgtggttcccagg
atcaggggcattcagagagcttgtatcgtgttcaaattgtctagactatcaggcacggcgacttaaagtcagatatggtc
aaacaaagaaaatgaaccaggaggcagattatgtacacatgctgaatgccaccatgtgtgccacgaccagaacgatatgt
gccatactagaaaactaccaagaagaagatggaa

Protein
Protein IDpfu_aug1.0_33345.1_12144.t1
Definition-
>pfu_aug1.0_33345.1_12144.t1
RYRADLLNKQIGVCSKVIGEKMKAKEPQGEDKTVPENITTNIEGFTKEDIQSLAVVQIKELKSLIEQQKVQNAADLVKHE
TDRNEALKEVANLTHETCIISNDEDENGVERTYGDCESRKKYSHVDLVVMVDGVDLDRGSVTAGGRGYYLKGPLVFMEQA
LINLAMKMLHDRSFVPLYTPFFMRKEVMQEVAQLSQFDEELYKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLKVRYGQ
TKKMNQEADYVHMLNATMCATTRTICAILENYQEEDG

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