Gene
| Gene Model ID | pfu_aug1.0_3338.1_16085 |
|---|---|
| Locus | scaffold3338.1 : 12436 ... 29037 : + |
| To GenomeBrowser | scaffold3338.1:12436..29037 |
| Genes list of scaffold | scaffold3338.1 |
| Synonym | pfu_aug2.0_35.1_16748 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3338.1_16085.t1 | 1 | 1 | VWA | 17 | 73 | 5.7e-08 | 32.6 | 3.9e-11 | 9.7e-08 | 31.9 |
| pfu_aug1.0_3338.1_16085.t1 | 2 | 1 | Sushi | 105 | 145 | 2.7e-12 | 46.8 | 5.4e-09 | 1.3e-05 | 25.3 |
| pfu_aug1.0_3338.1_16085.t1 | 2 | 2 | Sushi | 150 | 202 | 2.7e-12 | 46.8 | 4.8e-08 | 0.00012 | 22.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3338.1_16085.t1 | gi|340370324|ref|XP_003383696.1| | 3.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3338.1_16085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3338.1_16085.t1 atgctcatttctccattgtgggtgccgttggtgcgttcggattgtcgtgataggacagacgccagtaatatcatggtggt aatgacggacggaatatcatatgacgattattcagaagaagacgaggcaaatctttgtagagcagccggtattaaagtgg catctgttgctataggaagtaatctagacgaaaccatgttacgaaatgttgcgtattccgagagctggtatcttcaaact gatttcgactccttaggggacgattttgtgacattaatggaggctttaggaccttgtccatcagtgcaggtaacaagtta caaagttggtggaacagcagtctcaagctgtaacgagggctattacatcacaggaggtgatactattagaacgtgtaagg attcaggctactggacaggacaaaagctgcaatgtgacaaggttcctgaatgttcatccgaagaggcatcgtctcctaat gcagttgtaaatatcactagtttaaaagttggtggcagcgcattttctagttgtattgacggttatagggttagtggcgg agattcaataaggatttgtaacgcttcaggacagtggagtggacaacgtatcgtttgtaccaaagtccatgtatgtgccc atgacgacctcttagaaccacattcagaagttacgactcaacgttgtttcaactttcaaatccaatcaaaactcgacgtc atttcaacgttttgtactgacgttattgttaatggagagattcatacaagtgtgtatgacaaaagagatgatttaggatt caacatagtcatttttcctggcttggcggtgatgttcctagattaccgtcatgcggcatctacatttcacagctcatccg atcttgctctatcagactttcatatattcccaaaactgaaagcagctatttctggcacccactttcagtccgatgatgac gtcatacttgtagtggatgactttctgaccagtcaagataaggagttctttcaaagtggtattgaggcccttaaatacca gtggaaaaagtgtaaagatactgaaacggtttacgtggaaaaataa |
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Protein
| Protein ID | pfu_aug1.0_3338.1_16085.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3338.1_16085.t1 MLISPLWVPLVRSDCRDRTDASNIMVVMTDGISYDDYSEEDEANLCRAAGIKVASVAIGSNLDETMLRNVAYSESWYLQT DFDSLGDDFVTLMEALGPCPSVQVTSYKVGGTAVSSCNEGYYITGGDTIRTCKDSGYWTGQKLQCDKVPECSSEEASSPN AVVNITSLKVGGSAFSSCIDGYRVSGGDSIRICNASGQWSGQRIVCTKVHVCAHDDLLEPHSEVTTQRCFNFQIQSKLDV ISTFCTDVIVNGEIHTSVYDKRDDLGFNIVIFPGLAVMFLDYRHAASTFHSSSDLALSDFHIFPKLKAAISGTHFQSDDD VILVVDDFLTSQDKEFFQSGIEALKYQWKKCKDTETVYVEK |
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