Gene
| Gene Model ID | pfu_aug1.0_33411.1_40916 |
|---|---|
| Locus | scaffold33411.1 : 1 ... 5876 : + |
| To GenomeBrowser | scaffold33411.1:1..5876 |
| Genes list of scaffold | scaffold33411.1 |
| Synonym | pfu_aug2.0_23.1_10094 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_33411.1_40916.t1 | 1 | 1 | eIF2A | 19 | 103 | 4.9e-29 | 101.4 | 4.1e-33 | 6.1e-29 | 101.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_33411.1_40916.t1 | gi|327266884|ref|XP_003218233.1| | PREDICTED: eukaryotic translation initiation factor 2A [Anolis carolinensis] | 2.0e-36 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_33411.1_40916.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33411.1_40916.t1 actttctcatattaataaatggaattttggcacattatattttattgatcccttaacaagcaaacttctctgccttgctg gatttggaaatttacgaggaaacttggaattctgggatccaaaaagcaggaagttgatagctcagactcagtctcccgac tcgacaagctttgagtggtgccctgacggacagcatgtgcttacagctactactgccccgagattacgtgtcgctaatgg gtatagagtgtggcattattcaggaaattgtctcaagcaggtgttgatagataagggcagagaattatgggaagcaagat ggcagcccggaagttattccgaaccagtgataagaacacataacctgccagcagcaggaaatacatcatcagcccctgct ccagaaggtaaaggagcataccgtcctccccaagctcgtggtacgtctgcctccatcaaactacatgagtatgaagctcc gtctgatccaaacaagaaagctgaagatccaaacaagcctgtcagtaaaaacaagaaaaagagagacgcaaagaaggcca aagctgctcaagaaggcgctgtgagttga |
|
Protein
| Protein ID | pfu_aug1.0_33411.1_40916.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33411.1_40916.t1 LSHINKWNFGTLYFIDPLTSKLLCLAGFGNLRGNLEFWDPKSRKLIAQTQSPDSTSFEWCPDGQHVLTATTAPRLRVANG YRVWHYSGNCLKQVLIDKGRELWEARWQPGSYSEPVIRTHNLPAAGNTSSAPAPEGKGAYRPPQARGTSASIKLHEYEAP SDPNKKAEDPNKPVSKNKKKRDAKKAKAAQEGAVS |
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