Gene
| Gene Model ID | pfu_aug1.0_3348.1_37566 |
|---|---|
| Locus | scaffold3348.1 : 17096 ... 26466 : + |
| To GenomeBrowser | scaffold3348.1:17096..26466 |
| Genes list of scaffold | scaffold3348.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3348.1_37566.t1 | 1 | 1 | RIO1 | 175 | 283 | 3.8e-31 | 107.9 | 4.9e-35 | 7.3e-31 | 106.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3348.1_37566.t1 | gi|57525667|ref|NP_001003614.1| | serine/threonine-protein kinase RIO3 [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3348.1_37566.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3348.1_37566.t1 atgaaggagccagattttggcgagcttgttgctgctgccgctgccagtggagaggacacagccaatgatttattattagc acagatgttacaacatgagtttgataaagaacacgaccaacagctgaagagggaggaaagccattataacggaaacaaca aagttgctgtgtcctttcaaaacttccgtgcagtacatccagcttacgatgatgaagaagaagaggaagaagaagtaacg gaaagaaaaacagaatgggatgtgtcacctccaagttacaagaaaaacggaacgtcaggaagtgggaaaaatataacaac taagcacgatgctgtaatatgtggaagacgcaatgcatccaagctcatggacctacccccagaattccacagtggtgatg gtgagggaatggacttgaagctttctaacaaagtatacaacaaactgaagttacattccgaagcagaaaataaacggagc cagaggctacatgagaaaaaggagcattccactgcggataagacattgtcagaggagtgtgctatcaagatttataagac aacgctgaatgaattcaaaaacagagaacagtacatacatggagatcataggttctcaaaggatgactataaaaaacaca atccacggaaaattatcaaaatgtggggagagaaagaaaccgctaatctcaacagaatgaagaaattcgggatcccctgt ccccacgtacagttgttaaggaagcacattcttgtgatgtcatttatcggtaaagatggtaaacctgcatcgaagctgaa agacgcctgccttgatacagccgatctggaggtcgcttatgctcaaatggaagattttttccgtaaaagtggtgttcatg acgtattgagcccagaagaattattcaaccatatcacagacctcaaaatcaccggtaaaggaaaagacttcgaggctcag gtacaaagatacgacaaagaaaagagcgccgagctcttagccaatcagagcagctttaaaacctacccatttgactattt cttcgagaagtcattgaaagagaggacagaggagtgtgacgatgaaaatttagatgatagggacgatccatttgaatatt tttacgaaaaatctttaaaggacaaagaaggtgcggaggcccaagtttcctctgatagtgacagtgacatagatgaaagt agctttgtattagtggataaagacaaaattaacttgggataa |
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Protein
| Protein ID | pfu_aug1.0_3348.1_37566.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3348.1_37566.t1 MKEPDFGELVAAAAASGEDTANDLLLAQMLQHEFDKEHDQQLKREESHYNGNNKVAVSFQNFRAVHPAYDDEEEEEEEVT ERKTEWDVSPPSYKKNGTSGSGKNITTKHDAVICGRRNASKLMDLPPEFHSGDGEGMDLKLSNKVYNKLKLHSEAENKRS QRLHEKKEHSTADKTLSEECAIKIYKTTLNEFKNREQYIHGDHRFSKDDYKKHNPRKIIKMWGEKETANLNRMKKFGIPC PHVQLLRKHILVMSFIGKDGKPASKLKDACLDTADLEVAYAQMEDFFRKSGVHDVLSPEELFNHITDLKITGKGKDFEAQ VQRYDKEKSAELLANQSSFKTYPFDYFFEKSLKERTEECDDENLDDRDDPFEYFYEKSLKDKEGAEAQVSSDSDSDIDES SFVLVDKDKINLG |
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