Gene
| Gene Model ID | pfu_aug1.0_3356.1_16098 |
|---|---|
| Locus | scaffold3356.1 : 20939 ... 29252 : - |
| To GenomeBrowser | scaffold3356.1:20939..29252 |
| Genes list of scaffold | scaffold3356.1 |
| Synonym | pfu_aug2.0_1314.1_14951 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3356.1_16098.t1 | 2 | 1 | SRCR | 10 | 111 | 0.0 | 155.1 | 1.9e-21 | 2.9e-18 | 66.0 |
| pfu_aug1.0_3356.1_16098.t1 | 2 | 1 | SRCR_2 | 16 | 48 | 9.9e-08 | 32.1 | 0.0019 | 2.8 | 8.2 |
| pfu_aug1.0_3356.1_16098.t1 | 2 | 2 | SRCR | 130 | 221 | 0.0 | 155.1 | 1.8e-29 | 2.6e-26 | 91.8 |
| pfu_aug1.0_3356.1_16098.t1 | 2 | 2 | SRCR_2 | 134 | 173 | 9.9e-08 | 32.1 | 2.6e-08 | 3.8e-05 | 23.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3356.1_16098.t1 | gi|115960520|ref|XP_001183040.1| | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug1.0_3356.1_16098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3356.1_16098.t1 gtatacagtaccagttttaccctaactccacatataacagaggccgtgtggagatacagtatgagggtacatggggagga gtgtgtgatttcctctgggattctcgtgatgccgaagttttctgtagaagccagggatttaaaggagggatagagatagc tggaggacagtttggacagagttctggtcctttatggttcaccagagtgtcttgtgatggtaacgagccagacatattga ggtgcagccattcaggattcaataactcagggaatattgcctcgacatatgaacgattgtgtaagaagaggtcgaatgat gcagcagcatggtgctttaacgaaactgttgagatacagtccattcgtcttgctgatggagacggaacattcggacgagt tgaggtttttttggctggaccaaatgaatggggaaccatctgtgacgactattgggatgatagggatgccactgtagtat gccggcaacttggatttgccaccggcattgccaaaaaacaaggcagctttggtcgtggttcaggtcccatctggttggac aatatggattgctcaggtaaagaggacagaatccaggaatgtaagcataatggattcaacatccagaactgtcaccatgg tgaagattcaggagttgtgtgtaaaggtgaagcagactcggtaaaatcaagcccggtcaggacattacagaaagaagaaa atctagctgtggctataactgtaccgataattgttatattaattgtaataattatagtaataggcgtgtgttactggcga caaagagagggtggggatagtatgaaaacaacgctagtagacaatgaaattcacgacccgtcggtgatgccatcaggttc taccgctggacatagctcgtcagacgctggagggagagttacattgtcacggcttaaagctacgttttcaaaagctatag gaacaggaagtgactcaaaacctaaaggacttagtaatccaaattatgaaaatatgagaaatgaagattttcagctggga cccccatcgggagagtccaacatgtag |
|
Protein
| Protein ID | pfu_aug1.0_3356.1_16098.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3356.1_16098.t1 IQYQFYPNSTYNRGRVEIQYEGTWGGVCDFLWDSRDAEVFCRSQGFKGGIEIAGGQFGQSSGPLWFTRVSCDGNEPDILR CSHSGFNNSGNIASTYERLCKKRSNDAAAWCFNETVEIQSIRLADGDGTFGRVEVFLAGPNEWGTICDDYWDDRDATVVC RQLGFATGIAKKQGSFGRGSGPIWLDNMDCSGKEDRIQECKHNGFNIQNCHHGEDSGVVCKGEADSVKSSPVRTLQKEEN LAVAITVPIIVILIVIIIVIGVCYWRQREGGDSMKTTLVDNEIHDPSVMPSGSTAGHSSSDAGGRVTLSRLKATFSKAIG TGSDSKPKGLSNPNYENMRNEDFQLGPPSGESNM |
|