Gene
| Gene Model ID | pfu_aug1.0_33597.1_33892 |
|---|---|
| Locus | scaffold33597.1 : 2884 ... 6605 : - |
| To GenomeBrowser | scaffold33597.1:2884..6605 |
| Genes list of scaffold | scaffold33597.1 |
| Synonym | pfu_aug2.0_32.1_06784 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_33597.1_33892.t1 | 2 | 1 | LRR_8 | 2 | 38 | 4.0e-06 | 26.4 | 4.1e-07 | 0.00068 | 19.3 |
| pfu_aug1.0_33597.1_33892.t1 | 2 | 1 | LRR_4 | 5 | 42 | 1.3e-07 | 31.0 | 2.2e-07 | 0.00036 | 20.0 |
| pfu_aug1.0_33597.1_33892.t1 | 2 | 2 | LRR_4 | 51 | 67 | 1.3e-07 | 31.0 | 2.2e-05 | 0.035 | 13.7 |
| pfu_aug1.0_33597.1_33892.t1 | 2 | 2 | LRR_8 | 51 | 67 | 4.0e-06 | 26.4 | 0.00051 | 0.85 | 9.4 |
| pfu_aug1.0_33597.1_33892.t1 | 1 | 1 | TIR | 201 | 335 | 9.6e-24 | 83.4 | 1.1e-26 | 1.8e-23 | 82.5 |
| pfu_aug1.0_33597.1_33892.t1 | 1 | 1 | TIR_2 | 202 | 304 | 1.1e-15 | 57.5 | 1.2e-18 | 2.1e-15 | 56.7 |
Transcript
| Transcript ID | pfu_aug1.0_33597.1_33892.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33597.1_33892.t1 atgtacaacgcagaaattattgatatatcaaaaaatgaaatcagtgttctatcaccagccttcttgtggaacacaaccaa tatccggatcttagacatccataataactatatttcagatttcaaggtcaaaactgaacacatgatgtatcttcgaaaat tgaatttatcaaataacaaactgtccagtctagatggtctgaccatgaagacgatctcaaaactgtttaagagaaataat gctattgttgatatatcagagaacccgatcgaatgtacatgtaaaaatgtgaaatttctgaaatggatgcattctcatag agcccattttgaccaaatagaaaactataaatgctctcacattaagcagctaaatttcaatttttcactgttcgactcat cgatccttttgatggagaggcattgcacttcgtatgatttgatcatatgtgtgtgtgttacttgtttgaccgtgatgata acattaatcattgcaaggatagcttacaaaaacagatggaaaattcgatattttttgtacatgacaaaacttcaatacag tggttacgttaagttggaacagcataactttgattacgacgcttttatttcgtacgcagcggatgatcgatggtttgttg ttgatggtataatgccaatattggaaaaagaaaaaggacttcgctttattcttcacgacagagacttccttcctggaaat gacataagcgacaatataatggcggccattagaaacagtcgaaagaccgtttgcgtcctttcaaaaaactttttcaagtc atactggtgtaccttcgaattcaatatggcatgtatggagaatttcaatgcgaggaaaggtgagaagattatatttttga tcttgctggaagatatcagagacgaagatttacagcccaaaatgctggaatacatggaagataaatcatacatcaaagtt ccaactgacggcgataataatgctgtattttggaataatatctataaagctctgatagattaa |
|
Protein
| Protein ID | pfu_aug1.0_33597.1_33892.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_33597.1_33892.t1 MYNAEIIDISKNEISVLSPAFLWNTTNIRILDIHNNYISDFKVKTEHMMYLRKLNLSNNKLSSLDGLTMKTISKLFKRNN AIVDISENPIECTCKNVKFLKWMHSHRAHFDQIENYKCSHIKQLNFNFSLFDSSILLMERHCTSYDLIICVCVTCLTVMI TLIIARIAYKNRWKIRYFLYMTKLQYSGYVKLEQHNFDYDAFISYAADDRWFVVDGIMPILEKEKGLRFILHDRDFLPGN DISDNIMAAIRNSRKTVCVLSKNFFKSYWCTFEFNMACMENFNARKGEKIIFLILLEDIRDEDLQPKMLEYMEDKSYIKV PTDGDNNAVFWNNIYKALID |
|