Gene
| Gene Model ID | pfu_aug1.0_3361.1_08602 |
|---|---|
| Locus | scaffold3361.1 : 24396 ... 55664 : + |
| To GenomeBrowser | scaffold3361.1:24396..55664 |
| Genes list of scaffold | scaffold3361.1 |
| Synonym | pfu_aug2.0_805.1_17850 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3361.1_08602.t1 | 4 | 1 | Laminin_EGF | 114 | 159 | 2.2e-10 | 40.3 | 8.7e-06 | 0.032 | 14.1 |
| pfu_aug1.0_3361.1_08602.t1 | 5 | 1 | hEGF | 131 | 142 | 1.9e-07 | 30.6 | 8.3e-07 | 0.0031 | 17.4 |
| pfu_aug1.0_3361.1_08602.t1 | 5 | 2 | hEGF | 146 | 155 | 1.9e-07 | 30.6 | 0.002 | 7.4 | 6.8 |
| pfu_aug1.0_3361.1_08602.t1 | 4 | 2 | Laminin_EGF | 239 | 267 | 2.2e-10 | 40.3 | 1.7e-05 | 0.062 | 13.2 |
| pfu_aug1.0_3361.1_08602.t1 | 5 | 3 | hEGF | 244 | 256 | 1.9e-07 | 30.6 | 4.0e-05 | 0.15 | 12.2 |
| pfu_aug1.0_3361.1_08602.t1 | 4 | 3 | Laminin_EGF | 273 | 301 | 2.2e-10 | 40.3 | 2.3e-05 | 0.085 | 12.8 |
| pfu_aug1.0_3361.1_08602.t1 | 5 | 4 | hEGF | 287 | 299 | 1.9e-07 | 30.6 | 1.2e-05 | 0.046 | 13.8 |
| pfu_aug1.0_3361.1_08602.t1 | 4 | 4 | Laminin_EGF | 388 | 405 | 2.2e-10 | 40.3 | 6.9e-06 | 0.025 | 14.4 |
| pfu_aug1.0_3361.1_08602.t1 | 5 | 5 | hEGF | 391 | 403 | 1.9e-07 | 30.6 | 3.3e-07 | 0.0012 | 18.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3361.1_08602.t1 | gi|47225870|emb|CAF98350.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 9.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_3361.1_08602.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3361.1_08602.t1 atgcacaatatggaccatagctacgagggtcaggccaggatagactatcgaaatacagtgtacgggaacgaggtttacct tggctgctttactgacaatgacgtcaactatcgcactctggcacacactgtcagtctcacttctacccaatcaaacaaca tgactccacaactgtgtatgactctctgcaggtatgtttatattggctgcttaaacgacaatgacgtcacgtatcgcact ctggcacacactgtcagtctcacttctaccctatcaaacaacatgacgccacagctgtgtatgacactctgcaggtatgg tagaaattgccagtcacgctgtgcttgtgttatggccaacacagacacgtgtaatatagaaaacgggttatgctcctgta agccgggcttcaccgggcatcgatgcgagctggcgtgcccgacgggctactatggaagtgactgtaataacacatgttct cagtgtcaacacagagcatcttgcgactcggaaaatatggtgtcaactgccagaaactgtgcacttgccttcatggcaca tgccatccaggtggtatatgtcatccaggtacatgtgtgtgtatatgtcaaccagggtacggtggtcttacctgctacac accttgtcagaattacacatacggaccgggctgtatccacacatgtaaccagtgcgtccacggaaagtcatgtgacccgg nttaccggtatgtgctcgtgcgctccaggttaccgtggagttctatgtggacagaagtgtgtccctggtaattatggtca ggactgtaaactgagatgcaattgccaaaatggaggtacgtgtgacaacgtggacgggagttgtagttgtccctatggtt acacaggaaatgattgttctcagaagtgtgttctagtacacagtcgtggggaaaacgctgcagtcatctgtgtaactgta acagtgccccctgtaatcctgtggacggacgatgtgagtgtccagcgggcaaaaagggacaccactgtgaacaagaatgt gatgatgggtactttggtgccgggtgtgaccagcaatgtcccgtctgttaccatggcggctcgtgcgaccccgctacagg tcaatgtcagtgtgcggcaggatataccggaatcaactgtcagcaaaggtgtttgtcagtgtgctgcagggtatgaggga gataggtgtagccagaccactggtcaatcagccagactggtcaaccaggcaccacaatcaggtggcaataactcagtatc actttctaatgggtctgtagccgggctggctgtcggcatcgtcgtagcaatagcgctgatggccatcttgattgtactag ggatgaggagatattacactggaaggttcctacgctctgcgacagctgtcagatacgatcacagagattctgttaatgaa ccagatgatgacgacggaatgcgcgggttttccaatcctcaatatgaagagagcagggagaacagggtagccgcagaact ttcatctccaacacatgaaaatgaaacagatagctga |
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Protein
| Protein ID | pfu_aug1.0_3361.1_08602.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3361.1_08602.t1 MHNMDHSYEGQARIDYRNTVYGNEVYLGCFTDNDVNYRTLAHTVSLTSTQSNNMTPQLCMTLCRYVYIGCLNDNDVTYRT LAHTVSLTSTLSNNMTPQLCMTLCRYGRNCQSRCACVMANTDTCNIENGLCSCKPGFTGHRCELACPTGYYGSDCNNTCS QCQHRASCDSENMVSTARNCALAFMAHAIQVVYVIQVHVCVYVNQGTVVLPATHLVRITHTDRAVSTHVTSASTESHVTR XTGMCSCAPGYRGVLCGQKCVPGNYGQDCKLRCNCQNGGTCDNVDGSCSCPYGYTGNDCSQKCVLVHSRGENAAVICVTV TVPPVILWTDDVSVQRAKRDTTVNKNVMMGTLVPGVTSNVPSVTMAARATPLQVNVSVRQDIPESTVSKGVCQCAAGYEG DRCSQTTGQSARLVNQAPQSGGNNSVSLSNGSVAGLAVGIVVAIALMAILIVLGMRRYYTGRFLRSATAVRYDHRDSVNE PDDDDGMRGFSNPQYEESRENRVAAELSSPTHENETDS |
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