Gene
| Gene Model ID | pfu_aug1.0_3370.1_59209 |
|---|---|
| Locus | scaffold3370.1 : 5506 ... 16605 : + |
| To GenomeBrowser | scaffold3370.1:5506..16605 |
| Genes list of scaffold | scaffold3370.1 |
| Synonym | pfu_aug2.0_209.1_30431 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3370.1_59209.t1 | 8 | 1 | LRR_4 | 33 | 74 | 3.9e-40 | 134.8 | 1.2e-10 | 3.1e-07 | 29.8 |
| pfu_aug1.0_3370.1_59209.t1 | 7 | 1 | LRR_8 | 34 | 91 | 4.7e-37 | 125.5 | 1.2e-12 | 3.0e-09 | 36.5 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 1 | LRR_7 | 34 | 49 | 5.0e-11 | 40.9 | 0.5 | 1200.0 | 0.5 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 1 | LRR_1 | 35 | 55 | 2.1e-22 | 75.6 | 0.018 | 44.0 | 4.6 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 2 | LRR_1 | 57 | 78 | 2.1e-22 | 75.6 | 0.0047 | 12.0 | 6.4 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 2 | LRR_7 | 79 | 93 | 5.0e-11 | 40.9 | 0.03 | 73.0 | 4.2 |
| pfu_aug1.0_3370.1_59209.t1 | 8 | 2 | LRR_4 | 80 | 121 | 3.9e-40 | 134.8 | 5.6e-10 | 1.4e-06 | 27.7 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 3 | LRR_1 | 81 | 102 | 2.1e-22 | 75.6 | 0.0008 | 2.0 | 8.7 |
| pfu_aug1.0_3370.1_59209.t1 | 7 | 2 | LRR_8 | 95 | 122 | 4.7e-37 | 125.5 | 0.00018 | 0.44 | 10.3 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 3 | LRR_7 | 103 | 120 | 5.0e-11 | 40.9 | 0.25 | 620.0 | 1.4 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 4 | LRR_1 | 106 | 124 | 2.1e-22 | 75.6 | 0.0033 | 8.1 | 6.9 |
| pfu_aug1.0_3370.1_59209.t1 | 8 | 3 | LRR_4 | 129 | 161 | 3.9e-40 | 134.8 | 2.7e-05 | 0.067 | 12.8 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 5 | LRR_1 | 130 | 150 | 2.1e-22 | 75.6 | 0.003 | 7.5 | 7.0 |
| pfu_aug1.0_3370.1_59209.t1 | 7 | 3 | LRR_8 | 131 | 186 | 4.7e-37 | 125.5 | 1.5e-10 | 3.8e-07 | 29.7 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 4 | LRR_7 | 131 | 143 | 5.0e-11 | 40.9 | 0.38 | 940.0 | 0.9 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 5 | LRR_7 | 149 | 167 | 5.0e-11 | 40.9 | 0.0026 | 6.3 | 7.4 |
| pfu_aug1.0_3370.1_59209.t1 | 8 | 4 | LRR_4 | 153 | 186 | 3.9e-40 | 134.8 | 2.3e-09 | 5.8e-06 | 25.8 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 6 | LRR_1 | 153 | 169 | 2.1e-22 | 75.6 | 0.00051 | 1.3 | 9.3 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 6 | LRR_7 | 174 | 187 | 5.0e-11 | 40.9 | 0.0042 | 10.0 | 6.8 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 7 | LRR_1 | 175 | 194 | 2.1e-22 | 75.6 | 0.017 | 42.0 | 4.7 |
| pfu_aug1.0_3370.1_59209.t1 | 7 | 4 | LRR_8 | 219 | 258 | 4.7e-37 | 125.5 | 1.2e-08 | 2.9e-05 | 23.7 |
| pfu_aug1.0_3370.1_59209.t1 | 8 | 5 | LRR_4 | 224 | 262 | 3.9e-40 | 134.8 | 2.0e-10 | 4.9e-07 | 29.2 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 8 | LRR_1 | 224 | 242 | 2.1e-22 | 75.6 | 0.0021 | 5.1 | 7.5 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 7 | LRR_7 | 224 | 235 | 5.0e-11 | 40.9 | 0.01 | 25.0 | 5.6 |
| pfu_aug1.0_3370.1_59209.t1 | 7 | 5 | LRR_8 | 247 | 304 | 4.7e-37 | 125.5 | 1.2e-10 | 2.9e-07 | 30.1 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 9 | LRR_1 | 248 | 262 | 2.1e-22 | 75.6 | 0.0017 | 4.3 | 7.7 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 8 | LRR_7 | 248 | 261 | 5.0e-11 | 40.9 | 0.0041 | 10.0 | 6.8 |
| pfu_aug1.0_3370.1_59209.t1 | 8 | 6 | LRR_4 | 270 | 304 | 3.9e-40 | 134.8 | 1.9e-10 | 4.7e-07 | 29.2 |
| pfu_aug1.0_3370.1_59209.t1 | 7 | 6 | LRR_8 | 270 | 312 | 4.7e-37 | 125.5 | 1.8e-08 | 4.5e-05 | 23.1 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 10 | LRR_1 | 270 | 291 | 2.1e-22 | 75.6 | 2.0e-05 | 0.05 | 13.6 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 9 | LRR_7 | 270 | 285 | 5.0e-11 | 40.9 | 0.00098 | 2.4 | 8.7 |
| pfu_aug1.0_3370.1_59209.t1 | 8 | 7 | LRR_4 | 293 | 332 | 3.9e-40 | 134.8 | 3.8e-07 | 0.00094 | 18.7 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 11 | LRR_1 | 293 | 316 | 2.1e-22 | 75.6 | 0.0029 | 7.2 | 7.0 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 10 | LRR_7 | 293 | 305 | 5.0e-11 | 40.9 | 0.0036 | 8.9 | 7.0 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 11 | LRR_7 | 317 | 333 | 5.0e-11 | 40.9 | 0.8 | 2000.0 | -0.1 |
| pfu_aug1.0_3370.1_59209.t1 | 7 | 7 | LRR_8 | 318 | 373 | 4.7e-37 | 125.5 | 1.8e-08 | 4.5e-05 | 23.1 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 12 | LRR_1 | 318 | 338 | 2.1e-22 | 75.6 | 0.019 | 46.0 | 4.6 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 12 | LRR_7 | 340 | 356 | 5.0e-11 | 40.9 | 0.0015 | 3.8 | 8.1 |
| pfu_aug1.0_3370.1_59209.t1 | 8 | 8 | LRR_4 | 341 | 374 | 3.9e-40 | 134.8 | 2.4e-05 | 0.059 | 13.0 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 13 | LRR_1 | 341 | 360 | 2.1e-22 | 75.6 | 0.00099 | 2.4 | 8.4 |
| pfu_aug1.0_3370.1_59209.t1 | 13 | 13 | LRR_7 | 364 | 376 | 5.0e-11 | 40.9 | 0.47 | 1200.0 | 0.6 |
| pfu_aug1.0_3370.1_59209.t1 | 14 | 14 | LRR_1 | 365 | 377 | 2.1e-22 | 75.6 | 0.047 | 120.0 | 3.3 |
| pfu_aug1.0_3370.1_59209.t1 | 5 | 1 | Gelsolin | 518 | 589 | 0.0 | 155.0 | 1.2e-14 | 3.0e-11 | 42.8 |
| pfu_aug1.0_3370.1_59209.t1 | 5 | 2 | Gelsolin | 631 | 702 | 0.0 | 155.0 | 1.8e-12 | 4.5e-09 | 35.8 |
| pfu_aug1.0_3370.1_59209.t1 | 5 | 3 | Gelsolin | 746 | 816 | 0.0 | 155.0 | 1.9e-16 | 4.7e-13 | 48.6 |
| pfu_aug1.0_3370.1_59209.t1 | 5 | 4 | Gelsolin | 909 | 993 | 0.0 | 155.0 | 0.0031 | 7.6 | 6.3 |
| pfu_aug1.0_3370.1_59209.t1 | 5 | 5 | Gelsolin | 1041 | 1110 | 0.0 | 155.0 | 7.9e-06 | 0.02 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3370.1_59209.t1 | gi|71894773|ref|NP_001025806.1| | protein flightless-1 homolog [Gallus gallus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3370.1_59209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3370.1_59209.t1 atggcatcgacgggggtgctgcctttcgtgagaggcatagacctcacaagtaatgattttcaagcagaaaagttccctaa acagatggcggaaatgacaggactcaggtggctacgtttaagcaagacaggattagagaagatcccagatgctttaggca agctgaaaaaacttgaacaccttaccataacaaaaaacaacatctcaagtttgggtgatgatttagaagaattaccagct ttacgcactttgaattgtagaaataacaaacttaaagacagcggcattccaaaggatatcttcaagcttgaggatttgtc tgtggtagatttaagttacaatgaattacaggatgttccccctacactagaaaaagccaaaaactgcatagtgcttaact taggacataatcatatagagatgatcccaaatcaactgttcatcaacctgacagatctgatatttgttgacctcagtaat aataatctagagacattgccaccgcagatgagacgtcttactaatttgaggacattgattttaaacaacaaccctcttat ccatgcccagctcaggcaacttccagcccttgttgaactggaaacacttcacatgaagaatgcgcaaaggacgatagcaa actttccatcaggattagatacgcttgttcatttgcaagatttggatctgtcgtgtaacgagttaccgagagtgcctgaa actctgtacaagcttgcatcagtgaagaggcttaacctcagcagtaatcaaattactgagctttctttggtgattgattc atgggttaacttggaaacattgaatttatctcgaaatatgctgaaaagtcttccatcatccctttacaaactgcagtctc taaagaagctttacttgaactgcaatcaactagactttgatggaatccctgctaacataggcaaactacataacctggag atcttcagtgcagcaaataacaatcttgaaatgattcctgaaggactttgcagatgtggaaagttgaaaaagttgattct caacgggaataatttggtaacactgccagatattcttcatctgctacctgaacttgagaccttggatgtgcgagataatc cgaatctagtcatgccaccgaaaccagaggagctgaggaagagttttgagtactacaacatagacttttcattgagtgga cagttgagacaggcaggtgcccctcctcctccgtctacagaggagtcacctgtccacaagagtgaccctgtagcaagaaa actgaggctcagaaggaggagggatggacaagaaagcgaaaaggtgctaaaaggtatgagagatgttgcaaagaataaaa cggatgctttaacagccaagcttgaggaagaagcaaaagaacccctcaaaccaaagaaatggaatgagcatctgcagcga cctcacttagactatagtgagatctttgatgaagaggttggacagattcctgggttgtcttgttgggagatagagaattt cttacctaaccaagtggaggagggtctgattgggaaattttatgaagcggactgttatattgtgttgcgtactttcatca atgattctaacagcttggattggcagatatggtactggataggagaacaagcgactcttgataagaaagcttgctcagct atacatgctgtaaatttgagaaatctgttgggagctgagtgcagaactatacgagaggagatgaatgatgaaaatgagga cttcctggagctttttgataatggcatatcatatattgaaggtggacgtacagctagtggatttttcactgttgaaaaca tcacatatgaagtcaagatgtatagaacttggggacaacagaaaatctcaatggaaagggttaggccaaggacaacaagc ttagatagaaggtttgtgttcctggtagatgcaggtactgacatttatatttggacaggtaaacttgcaaaaggtgtaac aaaaacaaaaaccagacttgttgcagaaaagatcaacaaaaatgagagaaagggcagttctgagattcatatggaataca tgggagaagaatcatcaggattctgggagcttcttggcacccaaccgtctgcaccgataggagaaattgtgtcggaagac tttgaaccagcagagccaagactgtataaagtaggacttggaatgggatatctagaattaccacaagttgaaattcctaa aaagagattagttcacagcttgttagatacaaagaatgtgtacattctggactgcaagtcagatttgtatgtgtggatcg gaaagaagtctaccagacttgttagagctgctgcactgaagctttctcaagagctgaatttcatgattgacagaccccca tgctgttctgttacaagatgcctacagggtacagagccacaaatttttaagactaaattcattggatgggatgatgtgtt agctgttgactttaccagaactgctgagtctgtcagcagacgaggtgctgatctgaaggtcatcatggagagagacaaaa tgaagactgacttatctgctctcttcatgcctagacagcctgcaatgccgtttgacgaagctgagcaggtgatgcaggac tggaatgatgatatggatggaatggaagcgtttgtacttgaggacaagaagtttgtacgtctgccagatgatgagttagg gatcttccacacccatgattgctatgtgttcctctgtagatactgggtgcctgttgatgagcctgaggatgaggatttag atgatgatgaggaacctccagaagaggacactaaatgtgttgtgtacttctggcaagggaggatggcctcaaacatggga tggctgaccttcaccttcagcttgcagaaaaagtttgaatcacttttcggagataaacttgaggttgtgaggacacatca gcagcaagaaaacctcaagttcctctctcatttcaagagagaatttgtcatcagagatggaaagagaaaaacaccaagtg caccagccgttaaaccgtctatagagttcttccatctacgtgccaatggtggtccaattgccactaggtgcattcagatt caaccaaatgcatctttactgaattcctgtttttgttacatcttgatggtgccttttgacagtgaggacttgagaggcgt ggtctatgtatggatagggaaaaaggcagagcaccaggaggctgaactagcagagaaaatagcgtacaagatgtatccag ataactacacagtacagatgatcaatgaaggggaggagccagagaacttcttctgggttggaattggtggaagaaaaccg tatgattctgatgccacctatatgaagtttgcccgcttgttcaggtgctccaatgaaaaaggatacttcactgtgtcaga gaaatgtgcagacttttgtcaggatgtacatattttaaggaagtctgtccataaacagtag |
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Protein
| Protein ID | pfu_aug1.0_3370.1_59209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3370.1_59209.t1 MASTGVLPFVRGIDLTSNDFQAEKFPKQMAEMTGLRWLRLSKTGLEKIPDALGKLKKLEHLTITKNNISSLGDDLEELPA LRTLNCRNNKLKDSGIPKDIFKLEDLSVVDLSYNELQDVPPTLEKAKNCIVLNLGHNHIEMIPNQLFINLTDLIFVDLSN NNLETLPPQMRRLTNLRTLILNNNPLIHAQLRQLPALVELETLHMKNAQRTIANFPSGLDTLVHLQDLDLSCNELPRVPE TLYKLASVKRLNLSSNQITELSLVIDSWVNLETLNLSRNMLKSLPSSLYKLQSLKKLYLNCNQLDFDGIPANIGKLHNLE IFSAANNNLEMIPEGLCRCGKLKKLILNGNNLVTLPDILHLLPELETLDVRDNPNLVMPPKPEELRKSFEYYNIDFSLSG QLRQAGAPPPPSTEESPVHKSDPVARKLRLRRRRDGQESEKVLKGMRDVAKNKTDALTAKLEEEAKEPLKPKKWNEHLQR PHLDYSEIFDEEVGQIPGLSCWEIENFLPNQVEEGLIGKFYEADCYIVLRTFINDSNSLDWQIWYWIGEQATLDKKACSA IHAVNLRNLLGAECRTIREEMNDENEDFLELFDNGISYIEGGRTASGFFTVENITYEVKMYRTWGQQKISMERVRPRTTS LDRRFVFLVDAGTDIYIWTGKLAKGVTKTKTRLVAEKINKNERKGSSEIHMEYMGEESSGFWELLGTQPSAPIGEIVSED FEPAEPRLYKVGLGMGYLELPQVEIPKKRLVHSLLDTKNVYILDCKSDLYVWIGKKSTRLVRAAALKLSQELNFMIDRPP CCSVTRCLQGTEPQIFKTKFIGWDDVLAVDFTRTAESVSRRGADLKVIMERDKMKTDLSALFMPRQPAMPFDEAEQVMQD WNDDMDGMEAFVLEDKKFVRLPDDELGIFHTHDCYVFLCRYWVPVDEPEDEDLDDDEEPPEEDTKCVVYFWQGRMASNMG WLTFTFSLQKKFESLFGDKLEVVRTHQQQENLKFLSHFKREFVIRDGKRKTPSAPAVKPSIEFFHLRANGGPIATRCIQI QPNASLLNSCFCYILMVPFDSEDLRGVVYVWIGKKAEHQEAELAEKIAYKMYPDNYTVQMINEGEEPENFFWVGIGGRKP YDSDATYMKFARLFRCSNEKGYFTVSEKCADFCQDVHILRKSVHKQ |
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