Gene
| Gene Model ID | pfu_aug1.0_3375.1_37571 |
|---|---|
| Locus | scaffold3375.1 : 1 ... 22265 : - |
| To GenomeBrowser | scaffold3375.1:1..22265 |
| Genes list of scaffold | scaffold3375.1 |
| Synonym | pfu_aug2.0_734.1_14508 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3375.1_37571.t1 | 2 | 1 | Integrin_beta | 2 | 130 | 0.0 | 243.0 | 0.0 | 0.0 | 169.4 |
| pfu_aug1.0_3375.1_37571.t1 | 2 | 2 | Integrin_beta | 130 | 218 | 0.0 | 243.0 | 1.9e-24 | 9.6e-21 | 74.1 |
Transcript
| Transcript ID | pfu_aug1.0_3375.1_37571.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3375.1_37571.t1 atgtctttcaaacttaaattccgattggctgagaagtatccaatagatctttattatttgatggatatgtcaagatcaat ggcggatgacaagcagacattagttaacatggtaccaattatagcaactgaaatgagaaaattttcagacgatttcagac tcggatttggatcgttcgtcgacaagccaatttcgccgtatgcaagtaccccagaatttactcaagggtcttgtgataca tgcgagcctacatatggattcagaaataacctcccacttgacgcagatgaaaggaaattccaagactcggtgaatagaac cagaatttctttcaacattgacgcaccagagggagggtttgatgcaataatgcaggtgtcaacatgcaatgattatcctt ctgttggtcaagtggcagagagggtaaaagatgagaacatcaatgttatattcgcagtaactgacgttcaagtacctacc tatgaaagacttcaaccatacatggctggatcacagataggcagcatggacgacaactcggcaaatgttgctgacctact gacggataaatacttgaacataacttcagtggtagaacttcttgttgagggaaacgaggatgttgaagtaacatttcgga caaattgtactggaattctgtcaaatagttctggcaacattgcatacatgcatcggcgctactattttttcagggacgat tccaatacgacaactatctgctcagacaggggagactgtgtttgtggaaaatgtgaatgtcggtcaaggtccagtaccag tactcagacatacacaggccgattctgtgaatgtgatgactacaactgtcctttctaccttaaccaaatttgtggagatg acggcactgtgtgtaattaccttgatgaggatgactgtctcttccgtttctcctatgactttgatgaagatcgtcagtat agaattaaagcattgacaataaaag |
|
Protein
| Protein ID | pfu_aug1.0_3375.1_37571.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3375.1_37571.t1 MSFKLKFRLAEKYPIDLYYLMDMSRSMADDKQTLVNMVPIIATEMRKFSDDFRLGFGSFVDKPISPYASTPEFTQGSCDT CEPTYGFRNNLPLDADERKFQDSVNRTRISFNIDAPEGGFDAIMQVSTCNDYPSVGQVAERVKDENINVIFAVTDVQVPT YERLQPYMAGSQIGSMDDNSANVADLLTDKYLNITSVVELLVEGNEDVEVTFRTNCTGILSNSSGNIAYMHRRYYFFRDD SNTTTICSDRGDCVCGKCECRSRSSTSTQTYTGRFCECDDYNCPFYLNQICGDDGTVCNYLDEDDCLFRFSYDFDEDRQY RIKALTIK |
|