Gene
| Gene Model ID | pfu_aug1.0_3378.1_16102 |
|---|---|
| Locus | scaffold3378.1 : 1 ... 17659 : + |
| To GenomeBrowser | scaffold3378.1:1..17659 |
| Genes list of scaffold | scaffold3378.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3378.1_16102.t1 | 1 | 1 | 5_nucleotid | 12 | 56 | 2.8e-12 | 45.9 | 5.1e-16 | 3.8e-12 | 45.4 |
| pfu_aug1.0_3378.1_16102.t1 | 1 | 1 | Ribosomal_L2 | 57 | 102 | 2.1e-08 | 33.9 | 4.1e-12 | 3.0e-08 | 33.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3378.1_16102.t1 | gi|22203719|gb|AAM94272.1| | ribosomal protein L8 [Azumapecten farreri] | 1.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_3378.1_16102.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3378.1_16102.t1 acaaccctaactacacagagacgagatctgacgcggtatttgccaataatgagatttccctcggtgatattgatatctat ggttttgattacgattatactttagcactgtacaagccagcacttcattccctgatatacaaactaggaggtcatgcgct tgttgagaaccttaaggacataattcacgatccaggtcgtggcgctcccctcgccagggtagtgttccgtgatccataca agtacagacacaagatggaaacatttgttgctacagagggaatgtacacaggacagtttgtttactgtggcaaaaaaggt atgtttacagatttcctcagataa |
|
Protein
| Protein ID | pfu_aug1.0_3378.1_16102.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3378.1_16102.t1 NPNYTETRSDAVFANNEISLGDIDIYGFDYDYTLALYKPALHSLIYKLGGHALVENLKDIIHDPGRGAPLARVVFRDPYK YRHKMETFVATEGMYTGQFVYCGKKGMFTDFLR |
|