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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3383.1_44653
Locus scaffold3383.1 : 19886 ... 33296 : +
To GenomeBrowser scaffold3383.1:19886..33296
Genes list of scaffold scaffold3383.1
Synonym pfu_aug2.0_762.1_07851

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3383.1_44653.t1 1 1 p450 48 302 3.1e-35 121.5 5.4e-39 4.0e-35 121.2

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_3383.1_44653.t1
Definition-
>pfu_aug1.0_3383.1_44653.t1
atgaccttagatacaagattattggtggtacagatagccgttgctactttggtcgcgtatgttatatggaaactgatttt
aactgttataagatacaggaaatattgtgagatttccaggaaaatcgtccttctaggagactatcaccctatatggggca
gcctacatctgttcagcacagtaaccgaatacttcgatgtagtcaaaaagttcatagacgaacaacgtccaaaaacctac
cagggatgggtgttgtttctctatccaaatataacagtgtgtcaccccgatactgccaggattctgttaaaatcctcgga
acccaaaaccaaataccacgctgggggtgcttatagaatgatcatgccgtggttaggtgacggtctgctcctgagtgatg
gcaggaagtgggaacgcaatagacgcatgttgacgccagccttccatttcgacatcctacgtccttacgttaaagtttat
aatgaagttaccaatatcttcttggacaatttgagtagagataacaagagagatggtaacgttgagatatcgaactacgt
tactctggcaacactggataccatgttacggtgctcattgtcttataatggaaatatacaacaagagggaaagtcaaatc
cttatgtgaaagctgttatcagattatcaaccttggtcttatataggtcaattcgaccatggttatactgggactgggca
ttctacatgacgtcaacgggtcgggaattcaccaaactctgtcattatgtacacgactttgctgacgagatcattcggaa
tagaaaagacgccctgcgtcaggatccaagtcagctgaacaaaagacgcctggatttccttgacattttagtcactgcaa
aggacgagaacggggaagggttatttcgtctcgatctagtggaaggacacaagtatgtagaagtaccggaagtagtgatg
cggtctgaatttggaattaaggtcagattagaggaacgacataaggacacgtga

Protein
Protein IDpfu_aug1.0_3383.1_44653.t1
Definition-
>pfu_aug1.0_3383.1_44653.t1
MTLDTRLLVVQIAVATLVAYVIWKLILTVIRYRKYCEISRKIVLLGDYHPIWGSLHLFSTVTEYFDVVKKFIDEQRPKTY
QGWVLFLYPNITVCHPDTARILLKSSEPKTKYHAGGAYRMIMPWLGDGLLLSDGRKWERNRRMLTPAFHFDILRPYVKVY
NEVTNIFLDNLSRDNKRDGNVEISNYVTLATLDTMLRCSLSYNGNIQQEGKSNPYVKAVIRLSTLVLYRSIRPWLYWDWA
FYMTSTGREFTKLCHYVHDFADEIIRNRKDALRQDPSQLNKRRLDFLDILVTAKDENGEGLFRLDLVEGHKYVEVPEVVM
RSEFGIKVRLEERHKDT

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