Gene
| Gene Model ID | pfu_aug1.0_3399.1_66671 |
|---|---|
| Locus | scaffold3399.1 : 58716 ... 83049 : + |
| To GenomeBrowser | scaffold3399.1:58716..83049 |
| Genes list of scaffold | scaffold3399.1 |
| Synonym | pfu_aug2.0_1103.1_11433 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3399.1_66671.t1 | 2 | 1 | Ank_2 | 23 | 101 | 2.1e-19 | 69.6 | 1.1e-08 | 1.5e-05 | 25.2 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 1 | Ank_5 | 25 | 50 | 2.0e-20 | 72.3 | 0.0069 | 9.3 | 6.6 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 1 | Ank | 28 | 47 | 3.6e-19 | 67.5 | 0.00068 | 0.92 | 9.4 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 1 | Ank_3 | 28 | 47 | 1.8e-14 | 52.3 | 0.014 | 19.0 | 5.8 |
| pfu_aug1.0_3399.1_66671.t1 | 3 | 1 | Ank_4 | 37 | 98 | 9.4e-13 | 48.3 | 4.0e-05 | 0.054 | 14.0 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 2 | Ank_5 | 71 | 99 | 2.0e-20 | 72.3 | 2.0e-05 | 0.027 | 14.7 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 2 | Ank | 79 | 100 | 3.6e-19 | 67.5 | 0.0039 | 5.2 | 7.0 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 2 | Ank_3 | 79 | 100 | 1.8e-14 | 52.3 | 0.017 | 23.0 | 5.5 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 3 | Ank_5 | 146 | 191 | 2.0e-20 | 72.3 | 3.7e-11 | 5.0e-08 | 32.9 |
| pfu_aug1.0_3399.1_66671.t1 | 3 | 2 | Ank_4 | 147 | 178 | 9.4e-13 | 48.3 | 9.8e-05 | 0.13 | 12.7 |
| pfu_aug1.0_3399.1_66671.t1 | 2 | 2 | Ank_2 | 149 | 219 | 2.1e-19 | 69.6 | 9.7e-14 | 1.3e-10 | 41.4 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 3 | Ank | 159 | 186 | 3.6e-19 | 67.5 | 4.2e-10 | 5.7e-07 | 29.0 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 3 | Ank_3 | 159 | 185 | 1.8e-14 | 52.3 | 8.8e-08 | 0.00012 | 21.9 |
| pfu_aug1.0_3399.1_66671.t1 | 3 | 3 | Ank_4 | 159 | 214 | 9.4e-13 | 48.3 | 2.5e-09 | 3.3e-06 | 27.4 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 4 | Ank_5 | 194 | 220 | 2.0e-20 | 72.3 | 4.2e-05 | 0.057 | 13.6 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 4 | Ank | 196 | 219 | 3.6e-19 | 67.5 | 3.6e-06 | 0.0049 | 16.6 |
| pfu_aug1.0_3399.1_66671.t1 | 4 | 4 | Ank_3 | 196 | 219 | 1.8e-14 | 52.3 | 1.3e-05 | 0.017 | 15.3 |
| pfu_aug1.0_3399.1_66671.t1 | 2 | 1 | LRR_4 | 336 | 373 | 8.3e-10 | 38.0 | 1.6e-06 | 0.0022 | 17.5 |
| pfu_aug1.0_3399.1_66671.t1 | 2 | 1 | LRR_8 | 336 | 374 | 3.2e-07 | 29.9 | 1.1e-05 | 0.015 | 15.0 |
| pfu_aug1.0_3399.1_66671.t1 | 2 | 2 | LRR_4 | 384 | 418 | 8.3e-10 | 38.0 | 1.9e-06 | 0.0025 | 17.3 |
| pfu_aug1.0_3399.1_66671.t1 | 2 | 2 | LRR_8 | 384 | 418 | 3.2e-07 | 29.9 | 0.00014 | 0.19 | 11.4 |
| pfu_aug1.0_3399.1_66671.t1 | 1 | 1 | Miro | 471 | 548 | 5.3e-06 | 26.9 | 9.0e-09 | 1.2e-05 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3399.1_66671.t1 | gi|321459037|gb|EFX70095.1| | hypothetical protein DAPPUDRAFT_300590 [Daphnia pulex] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug1.0_3399.1_66671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3399.1_66671.t1 atggggggaaatgtttgttttaataagttaccttttagatgtcctgaagttgtaactttgagaacaaacacagagaagtt acctctccatttgggagtagaagttcaaagtttagatgtcgtcaagtatttattggagtacaagtacccagaggtattac ttacaacttacagagatgatgaggctcaggtgacgtataagtttgcctttgatgttaacggcacagataactttggattt gcagcaatacatatggcagcagagagaagagccagggagattatagaatattttgtgcgattcagtgtcaaaagtgaaag taatgctaaaaatagagcactgagacagagggttaactctaaccttatttttagtgttgacccaggcaacttgtctactt cacaaggaggtcaagtgtcaaattcaaaagggttacaccatcccgtgaagattaatattactggacgaaatagctataca ccacttcacctggcagtgaagtacaaattcttggatattacaaatattctattgaaaaatggagcagacgtgaatctcct agcgaatgacggtggagagaataagtcagcattaatgatggcatgtgaaaatggagatgtggcaataatgaacaagttac ttggaaatggcgcagatgacctcgataagcgagtgttcagatatgccgtagataggcagcccaaaatgatccccatgtta cttaggtatagaactatcaaagacagttcaaatgaatatcgcatagatagacatgccatgaaacagctgtacctcagaga aagtgaaatggatgacagatttgatggtctgaactcactgaatgtagacttcaagaaaaagtttcctgtgcatcctgttc atataaaatggcaggatttacagcatctgacgtctttaaaggaggattggctacggaatgcaggattgcatcataacaag gacatgcagaacacgtatgataatccttatcctctttttgccataaccaagattgacgtctccagtaatcgtatcgggga tgaatttccatctgtgcttttcagacttccgtctcttcattgtttggttatttctaagaatcacattagccattttgagc aggagaaaccaagtgaattccaatgctttaatttggaggagcttgtgttagacacaaaccagatagaggtgttacctggt tatatatttaccttgccttcactgaagaaattctcagcagctgacaatagtctagtggagcttttttttcgcatccctcc aaatatcattatacatgaagcatattttctacttgtacagcatttttcacaaagaatagatggtgctgtgccaggaagaa gacaagatgggggtacgctgtccactgtgggcattgatatcaacgaaatagtgataggagaaaaacgtccaatggggcct gtaacgtttagaacttgggacttcggaggacagaaagagtattacgccacacatcagtacttcctgtcaccgagatcttt gtaccttgtgttatggaaactgacagaaggtgaacagggcatactgacaatatggcagtggctagtcaatatacaggcac gagctcctggtgctccagtgattataataggaactcacagagacatcctgactagtcgtaaaacaagacaaaattacccg gaaaactttgaggaagatatgaggaggaagataaatgagcagtttatcgcgatagaagaaccggagaaatgtggcctccc taatgtgattggtcagattaatgttagctgtgttaaaaatggggacaatgttaaagagttggtcgatatgatctacaaca aagtgtttgatctcaagcatccaagcatcttgttccactatgaagacttggcattgaaggacttgtatttcctgaatcct cagtggctgtgtgatcaactagctagagttgtaactgtggaccaagtcaacagcttcccacaaaacg |
|
Protein
| Protein ID | pfu_aug1.0_3399.1_66671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3399.1_66671.t1 MGGNVCFNKLPFRCPEVVTLRTNTEKLPLHLGVEVQSLDVVKYLLEYKYPEVLLTTYRDDEAQVTYKFAFDVNGTDNFGF AAIHMAAERRAREIIEYFVRFSVKSESNAKNRALRQRVNSNLIFSVDPGNLSTSQGGQVSNSKGLHHPVKINITGRNSYT PLHLAVKYKFLDITNILLKNGADVNLLANDGGENKSALMMACENGDVAIMNKLLGNGADDLDKRVFRYAVDRQPKMIPML LRYRTIKDSSNEYRIDRHAMKQLYLRESEMDDRFDGLNSLNVDFKKKFPVHPVHIKWQDLQHLTSLKEDWLRNAGLHHNK DMQNTYDNPYPLFAITKIDVSSNRIGDEFPSVLFRLPSLHCLVISKNHISHFEQEKPSEFQCFNLEELVLDTNQIEVLPG YIFTLPSLKKFSAADNSLVELFFRIPPNIIIHEAYFLLVQHFSQRIDGAVPGRRQDGGTLSTVGIDINEIVIGEKRPMGP VTFRTWDFGGQKEYYATHQYFLSPRSLYLVLWKLTEGEQGILTIWQWLVNIQARAPGAPVIIIGTHRDILTSRKTRQNYP ENFEEDMRRKINEQFIAIEEPEKCGLPNVIGQINVSCVKNGDNVKELVDMIYNKVFDLKHPSILFHYEDLALKDLYFLNP QWLCDQLARVVTVDQVNSFPQN |
|