Gene
| Gene Model ID | pfu_aug1.0_34.1_43431 |
|---|---|
| Locus | scaffold34.1 : 32834 ... 55985 : - |
| To GenomeBrowser | scaffold34.1:32834..55985 |
| Genes list of scaffold | scaffold34.1 |
| Synonym | pfu_aug2.0_530.1_00842 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_34.1_43431.t1 | 1 | 1 | F-box-like | 19 | 61 | 3.9e-09 | 36.0 | 2.7e-12 | 1.0e-08 | 34.7 |
| pfu_aug1.0_34.1_43431.t1 | 1 | 1 | F-box | 19 | 61 | 1.3e-07 | 31.0 | 8.9e-11 | 3.3e-07 | 29.7 |
| pfu_aug1.0_34.1_43431.t1 | 7 | 1 | WD40 | 135 | 168 | 1.5e-37 | 126.1 | 5.3e-10 | 2.0e-06 | 27.4 |
| pfu_aug1.0_34.1_43431.t1 | 7 | 2 | WD40 | 175 | 208 | 1.5e-37 | 126.1 | 1.3e-05 | 0.047 | 13.6 |
| pfu_aug1.0_34.1_43431.t1 | 7 | 3 | WD40 | 213 | 247 | 1.5e-37 | 126.1 | 9.4e-08 | 0.00035 | 20.3 |
| pfu_aug1.0_34.1_43431.t1 | 7 | 4 | WD40 | 253 | 288 | 1.5e-37 | 126.1 | 8.4e-07 | 0.0031 | 17.3 |
| pfu_aug1.0_34.1_43431.t1 | 7 | 5 | WD40 | 292 | 327 | 1.5e-37 | 126.1 | 9.2e-10 | 3.4e-06 | 26.7 |
| pfu_aug1.0_34.1_43431.t1 | 7 | 6 | WD40 | 332 | 345 | 1.5e-37 | 126.1 | 0.0013 | 5.0 | 7.1 |
| pfu_aug1.0_34.1_43431.t1 | 7 | 7 | WD40 | 414 | 448 | 1.5e-37 | 126.1 | 1.9e-06 | 0.007 | 16.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_34.1_43431.t1 | gi|291220974|ref|XP_002730498.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_34.1_43431.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34.1_43431.t1 atggaaaaaagaggggctggagacattataaatggtaatgtagatttcacaacatgtctaccaccagagctcatagagag gattctctttttactgacggcacaagaacttagtcggttttctcaagtatgcatcagctggagagaggcttcaaacaggg atcaactctggatgcaccactgcatggtcaggggatggatgcggtttggagtacagggagagattctgcatgaacagcca acgataaatcctgaaacaaatgtatcagggacatcacctgtcttccaactaccaagatatatttcaccagataccagact gttacctatatgtaaatggaaacatgtctttattaggattcatcatctatttaaaaactgggagaaaggtcgctacaccc agccagccatactcaaaggtcacaggaaaaaagtcacagcaatggattgtaataggtcatgtatagtgactggtagtgag gataaatctctgattatttgggatctttactcatgtcgtaaactctacagtattaactgccattctgactgtatcaatgt catcaaaatagtgaacaacaccatttacaccggctgtgatgacagcgctatcagagtaatcgactctacaacaggtcagc tgttatactcgttactagggcatgctggcaatgtagagcatatacttttgtatgatgaccttctcgttagtgctgctaca gatagaacactcagagtttggtgtctgaaagaaagaaaattgaaatattccttcaaagaccatgatgatgagattgagtg tcttaaaaactatggaaaccttgtggtatcaggaggctgggatacaaggttacacctgtatgatataacacggggaaaac tactgcaaaaactggagggacacactgaagttgtgagttgctgctactgtggtgaccagacggttgtgagtggtagcggt gactgtgacctcagaatttggcagatctcctccggagaatgtctccacatacttaaaggccatacaggagaagtggactt tatgaacgaccttaatcttagaatttcaactaaaaactgtaacctaagccaacaggctgaatccttccccctcagccctc ctccccccactctgtcacagacaggcttgaccttctctggaaaatttcttggcatccctaaaggactcagtttagatcgg atctttatcaaacttcatacactcattccttatggttatctgctgtacaccatgaaaggtcatctgggtgttgtccgttg tatgtacatcaacgaatatcgtctgatcagtggaggggaccaaaagaaaattgctgtctgggattatagagacaacatct cataa |
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Protein
| Protein ID | pfu_aug1.0_34.1_43431.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34.1_43431.t1 MEKRGAGDIINGNVDFTTCLPPELIERILFLLTAQELSRFSQVCISWREASNRDQLWMHHCMVRGWMRFGVQGEILHEQP TINPETNVSGTSPVFQLPRYISPDTRLLPICKWKHVFIRIHHLFKNWEKGRYTQPAILKGHRKKVTAMDCNRSCIVTGSE DKSLIIWDLYSCRKLYSINCHSDCINVIKIVNNTIYTGCDDSAIRVIDSTTGQLLYSLLGHAGNVEHILLYDDLLVSAAT DRTLRVWCLKERKLKYSFKDHDDEIECLKNYGNLVVSGGWDTRLHLYDITRGKLLQKLEGHTEVVSCCYCGDQTVVSGSG DCDLRIWQISSGECLHILKGHTGEVDFMNDLNLRISTKNCNLSQQAESFPLSPPPPTLSQTGLTFSGKFLGIPKGLSLDR IFIKLHTLIPYGYLLYTMKGHLGVVRCMYINEYRLISGGDQKKIAVWDYRDNIS |
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