Gene
| Gene Model ID | pfu_aug1.0_3401.1_66672 |
|---|---|
| Locus | scaffold3401.1 : 1 ... 22961 : + |
| To GenomeBrowser | scaffold3401.1:1..22961 |
| Genes list of scaffold | scaffold3401.1 |
| Synonym | pfu_aug2.0_2106.1_21940 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3401.1_66672.t1 | 2 | 1 | Nol1_Nop2_Fmu | 1 | 156 | 5.8e-19 | 68.5 | 3.3e-22 | 4.9e-18 | 65.4 |
| pfu_aug1.0_3401.1_66672.t1 | 2 | 2 | Nol1_Nop2_Fmu | 231 | 287 | 5.8e-19 | 68.5 | 0.042 | 620.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3401.1_66672.t1 | gi|321458018|gb|EFX69093.1| | hypothetical protein DAPPUDRAFT_329423 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3401.1_66672.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3401.1_66672.t1 tggggatggaactttaagaaaaaactgtgatatctgggacaaatggactcccaacaacgctgttagtctgcatacgatac agagtaagattttgaagagaggattagagctactgtgtgagggagggagactggtatattctacatgttccctgaatcct atagaggatgaagctgttgttggagccatgctgaaaaaatgtgaagggtcagttgagctagtggatgcaagtgatttggt acctggattgaagtatacaaagggcattaactcatggaaggtatttgtacgagactgcagcaaatcgtttgagacttttg aatcgataccaaagggatcttactcacactatctacccaccatgtttcctttaccaacagaggaaagtcagaaactaaac ttagatagatgcatgagagtgttaccccatcagcagaatacgggaggtttctttatagctgtccttcaaaaaaccacaaa tctaccatggcataaaccatctacttctcaaggtcagttgcacatacatcccccaaagcacatcgccaagaagatgtacg gctataaagaagatccttatatattcctggaggaagatgataacatgtggaatcctatcaaggatttcttcggtatacct aatgatttctgtaaaacccaagtgatgcacagaacggagaccggcaaacggaggacattatactatgtggcgtcaattct caaagacgtgatacaaacaaacaaggaccgtgtaaagtttatcaaccttggtattaagatatttggtcgcagcccctcac cattggtaccagaatgtgacttcagaattactcaagagggactgttagtaatgaaggagtacctaccggctcgctgtgcg gtcctctctaacaaagacatgttcacactgatactgaacgacaacccccatcttaatgacttctctacggacgggaaaga acagcttgaaaaaatcaccgctggtagtatggtgttctggtttaagccaacagaaagtgacccgcacccagactgtgacg tggttatttgtggatggagaggaaagacctctgtgcgagcattcctgaaccaaggtctcaaattccactatctacgactg ctaaatctccacctggcagaggaatacattgagaaaaagagggaaaagaaaagacaaaaggagagagaagaatttggtga gaaaatcgaacaaggacgttcttcagatgacattactgatcttcaagaagaggagagttcacctcaaagggagactacat gtgaagatgaaattatggaagatattcaagaagaggaagaaataaaagacgatcagaatgaagacattataaataaagat gatgttgtagctgaagaaactagtaaaatctcagatactgacggagctgtcagctag |
|
Protein
| Protein ID | pfu_aug1.0_3401.1_66672.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3401.1_66672.t1 GDGTLRKNCDIWDKWTPNNAVSLHTIQSKILKRGLELLCEGGRLVYSTCSLNPIEDEAVVGAMLKKCEGSVELVDASDLV PGLKYTKGINSWKVFVRDCSKSFETFESIPKGSYSHYLPTMFPLPTEESQKLNLDRCMRVLPHQQNTGGFFIAVLQKTTN LPWHKPSTSQGQLHIHPPKHIAKKMYGYKEDPYIFLEEDDNMWNPIKDFFGIPNDFCKTQVMHRTETGKRRTLYYVASIL KDVIQTNKDRVKFINLGIKIFGRSPSPLVPECDFRITQEGLLVMKEYLPARCAVLSNKDMFTLILNDNPHLNDFSTDGKE QLEKITAGSMVFWFKPTESDPHPDCDVVICGWRGKTSVRAFLNQGLKFHYLRLLNLHLAEEYIEKKREKKRQKEREEFGE KIEQGRSSDDITDLQEEESSPQRETTCEDEIMEDIQEEEEIKDDQNEDIINKDDVVAEETSKISDTDGAVS |
|