Gene
| Gene Model ID | pfu_aug1.0_3403.1_59223 |
|---|---|
| Locus | scaffold3403.1 : 14795 ... 26445 : - |
| To GenomeBrowser | scaffold3403.1:14795..26445 |
| Genes list of scaffold | scaffold3403.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3403.1_59223.t1 | 2 | 1 | Miro | 32 | 92 | 8.6e-10 | 39.1 | 3.1e-07 | 0.00033 | 21.1 |
| pfu_aug1.0_3403.1_59223.t1 | 4 | 1 | Ras | 33 | 79 | 2.3e-07 | 30.3 | 5.3e-05 | 0.056 | 12.8 |
| pfu_aug1.0_3403.1_59223.t1 | 4 | 2 | Ras | 112 | 147 | 2.3e-07 | 30.3 | 0.35 | 370.0 | 0.4 |
| pfu_aug1.0_3403.1_59223.t1 | 2 | 2 | Miro | 175 | 219 | 8.6e-10 | 39.1 | 1.0e-05 | 0.011 | 16.2 |
| pfu_aug1.0_3403.1_59223.t1 | 4 | 3 | Ras | 180 | 218 | 2.3e-07 | 30.3 | 4.9e-06 | 0.0052 | 16.1 |
| pfu_aug1.0_3403.1_59223.t1 | 4 | 4 | Ras | 237 | 263 | 2.3e-07 | 30.3 | 0.72 | 760.0 | -0.7 |
Transcript
| Transcript ID | pfu_aug1.0_3403.1_59223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3403.1_59223.t1 atgattccaccagagattcaagcaatggatgatcggtccatggaattatttatcaatgcattgaaaaaaggaacatacaa atcttatcttatccgcgtcatgctcgttggctattatggagtcggaaaaacaactcttagtaaaaaactactagggcttg actttgatcctagcatttatgagagcactgaaggaattgaaatacatgtaggtcattgcaatatgcaccaagaaacagga cagtggacgaaaggagaaaacgaaaatacgaaatctttagccaaaagtctaagagaacacggggtaattgacgatatgaa aaaggaagcgaagaagaggaagacagatgttgacgacattagaatgattaaggtagaaaattccgatgaagaagatgttg acattagaatgattaaagtagaaacttccgatgcagaagcaaaagcagaaaacatgaaagaagaattgaagaatggagaa attctactgaaggaaataattgagcctgaaccatcgaccgtacatgatcgagatatgtcaaaatacacaagaatacaagt atgggactttggaggtcagagcaactactgcaccacgcatcagtccttcctctcccaaagagctatctacctactgctgt ttgatatttctaggaaccttgacgaagatgttgaggacaaggatcttgatccatcggaaagaaaaaagtctacagtaaaa gatattggattgaaactttacacattcgtcattgatatcaaacggcgaaatatccagtttgcgatttggcaaaattgtat attttcagatgagttaaagaagatcctgacgacaatcccaacagcactcacaacagagcactatgttgagcatcgacgga cccctagcaagctagaggtgggatcaggtgcccgggaggagtaa |
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Protein
| Protein ID | pfu_aug1.0_3403.1_59223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3403.1_59223.t1 MIPPEIQAMDDRSMELFINALKKGTYKSYLIRVMLVGYYGVGKTTLSKKLLGLDFDPSIYESTEGIEIHVGHCNMHQETG QWTKGENENTKSLAKSLREHGVIDDMKKEAKKRKTDVDDIRMIKVENSDEEDVDIRMIKVETSDAEAKAENMKEELKNGE ILLKEIIEPEPSTVHDRDMSKYTRIQVWDFGGQSNYCTTHQSFLSQRAIYLLLFDISRNLDEDVEDKDLDPSERKKSTVK DIGLKLYTFVIDIKRRNIQFAIWQNCIFSDELKKILTTIPTALTTEHYVEHRRTPSKLEVGSGAREE |
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