Gene
| Gene Model ID | pfu_aug1.0_3427.1_44659 |
|---|---|
| Locus | scaffold3427.1 : 3901 ... 17675 : - |
| To GenomeBrowser | scaffold3427.1:3901..17675 |
| Genes list of scaffold | scaffold3427.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3427.1_44659.t1 | 2 | 1 | RVT_1 | 43 | 56 | 6.3e-35 | 120.4 | 0.22 | 3200.0 | -2.8 |
| pfu_aug1.0_3427.1_44659.t1 | 2 | 2 | RVT_1 | 74 | 319 | 6.3e-35 | 120.4 | 4.3e-39 | 6.3e-35 | 120.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3427.1_44659.t1 | gi|17529698|gb|AAL40415.1|AF369891_4 | endonuclease/reverse transcriptase [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3427.1_44659.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3427.1_44659.t1 atgatgaagatgcttacatttgtccttattgaaggtatcgaaaaactccttaaaaagttggacccttctaaggcctgtgg acctgatgaaattagaccccggatcctaaaggaattagcccatgaaatttcacccattctctgcataatttaccaaaaat ccctcgacactggtgacgtcccaaatgactggcgcgctgcacatgtttcgcccatatataaaaaggggtccaagtacaat cctgaaaactaccgacccatttctcttacgcgcatctgctgtaagatcttagaacatgtagtagttagttccatcatgac tcatgctgacacacacaatattttatatcctctccaacatggttttcgacgctctcgatcctgtgaaactcaacttttag aatttattgacgacatctccaaaaatatagaaaactctgcacaaacagatattttggtaatggatttttcaaaagctttt gataaagtcagtcataatttacttctccataaacttaaccactacggcataaaaggaaaaataaataggtggattaaaaa cttcttattttcttgtactcaggctgttatacttgagggtgtgacctccgattatgtccctgtcttgtctggagtgcccc aggggtccgttctcggccccagtctgtttcttttttacattaatgacatccctgttggtcttaactccactatccgtctc tttgctgatgacactattgcatatcttgttgtgaaatcaaaccatgactgtaaaacccttcagaatgacttagctaaatt aggcatttgggagaacaaatggaaaatggccttccaccctgataaatgtaacgtcctttccatctctaaaagtaaaaacc cgattaaatatgactataaattacatgaccaaacattaaaacacgttaacaaagctaaatacttaggcgttactgttcaa tcagatcttaaatggaacactcatgttaataacatcacacaaaaagcaaacaagactttaggcttccttaaaggaaattt aaatatcaattccacctcagtaaaggaacaggcatacaaatcactgattaggccaacattagaatatgcctgttcagttt gggacccatactttactgaggacataaataaaatagagaaaatccaaagaagagctgctagtttcttccagtttgatttg actgtgaaaatgcgtaaattccgatgttggctgaaattcaagttcggctcttaa |
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Protein
| Protein ID | pfu_aug1.0_3427.1_44659.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3427.1_44659.t1 MMKMLTFVLIEGIEKLLKKLDPSKACGPDEIRPRILKELAHEISPILCIIYQKSLDTGDVPNDWRAAHVSPIYKKGSKYN PENYRPISLTRICCKILEHVVVSSIMTHADTHNILYPLQHGFRRSRSCETQLLEFIDDISKNIENSAQTDILVMDFSKAF DKVSHNLLLHKLNHYGIKGKINRWIKNFLFSCTQAVILEGVTSDYVPVLSGVPQGSVLGPSLFLFYINDIPVGLNSTIRL FADDTIAYLVVKSNHDCKTLQNDLAKLGIWENKWKMAFHPDKCNVLSISKSKNPIKYDYKLHDQTLKHVNKAKYLGVTVQ SDLKWNTHVNNITQKANKTLGFLKGNLNINSTSVKEQAYKSLIRPTLEYACSVWDPYFTEDINKIEKIQRRAASFFQFDL TVKMRKFRCWLKFKFGS |
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