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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3428.1_23312
Locus scaffold3428.1 : 10842 ... 19135 : -
To GenomeBrowser scaffold3428.1:10842..19135
Genes list of scaffold scaffold3428.1
Synonym pfu_aug2.0_618.1_27597

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 3
>Adult tissues
mantleEdge 1
mantlePallium 1

Transcript
Transcript IDpfu_aug1.0_3428.1_23312.t1
Definition-
>pfu_aug1.0_3428.1_23312.t1
atgggcagcggaaagggcgaagccgaatttttaggtttgttactgactatctacggagatttgctcggcaaagccgagcc
tactatgggcttgatcaacccgacaaatctccggagacggccgagtagatgtggtggctgtaaggcagagtggttagtta
atggagaagttgtagactgtgatataaagacaggcatcgatagaccgtgtccagatggttcaacgcccaatgcaacatgt
cctataggaacctgcagtttcactatatgtcctctcaactcaaaagttagatgcactgtaaactactgtggctgttaccc
agagtttagagacatgaatggaaacgaggcagaatgtgattattacttgtggaatccgagaagaaaaccgaaaaagaagc
aagttcctccacttccatcaataggcggcagaagctcctcaggtgacacacctacaagacgcacggacctacttgacatt
ccgcttgacatgggtggtcctgtacctgtagcacctgtgataccttctggcggaggaggaccatcacctgtagatgaagc
ggtcctcagagagtctgctcagcgtggtctccaagccgcccttggtaatccttttgaattagagacttcaggaaatcctt
tacatccacctaaaacacctggtatgggtagacttggagagacaacaaacaacaaggttcctccctcagagcctaagcag
actggaactcaaatgagcacagatgtccttcgaaaatcagcagaacaaggcttacaagatgtcctaggtatacccttaca
tcaagcaaatcagattgataattctaacctgggacaaactggcagaaatgagtttggtaatgttgaccaaatttcagtag
aattccctcctgcctcatcttttgacagtatacatgatccattcatatcagatattcctccgccgcccagtgtacccatt
gtggatagctttggggatccatctcctgatatactcagccaaaacccagtggtacccaaaccacgtcctgatgtaaaagg
tagaaaaagatttggcggagggtcctctagcgttgacgtcaatcctgcggttgctgataacactccagttatatcgggaa
aaagtagattcggtgaacctcctcaagacacaggcattccacttgcagtcggaagctctggcagaggtcgattcggcaga
caggacgtcagtaattcaaaccctccaccagttgatacgggggctgctgctagacacaggaatagatttggaaatcgaaa
cgttgaaaactcggctgtcacgagtaacattgaaagtccgactcaaattcttgacaatcctcctgttgttgacgcatttg
gagatttttcacgaagggtagacaagcctgatccttctgttgttcgtacggccatttctggacgaagtagcaagaaacag
ccaccaagtcaatctgtacaagatatggctcccattgcaaagaaactgagtaaaaagcttccagcaaaagtcattgaaga
taagagaagaccatcacccaaaaatagaaatcatttgaaaagaagaggagatatgcgccctgataaaaagcctttacctg
atgttccaatgatgcaggacatacctctcgacaagaacgatccaagtatggtagacatggcaatgtcaggacaaccagca
gaccccggatcaaacattccggcccagaacgaggcaatgtccaatgttgttattttattcaatgacaatttaggttccca
gaacttaccagcatctatgctaaattggttaatgtcaggtttactgtccgatatgacaggggtcccagtacaatctatgg
acaaacaaccttaa

Protein
Protein IDpfu_aug1.0_3428.1_23312.t1
Definition-
>pfu_aug1.0_3428.1_23312.t1
MGSGKGEAEFLGLLLTIYGDLLGKAEPTMGLINPTNLRRRPSRCGGCKAEWLVNGEVVDCDIKTGIDRPCPDGSTPNATC
PIGTCSFTICPLNSKVRCTVNYCGCYPEFRDMNGNEAECDYYLWNPRRKPKKKQVPPLPSIGGRSSSGDTPTRRTDLLDI
PLDMGGPVPVAPVIPSGGGGPSPVDEAVLRESAQRGLQAALGNPFELETSGNPLHPPKTPGMGRLGETTNNKVPPSEPKQ
TGTQMSTDVLRKSAEQGLQDVLGIPLHQANQIDNSNLGQTGRNEFGNVDQISVEFPPASSFDSIHDPFISDIPPPPSVPI
VDSFGDPSPDILSQNPVVPKPRPDVKGRKRFGGGSSSVDVNPAVADNTPVISGKSRFGEPPQDTGIPLAVGSSGRGRFGR
QDVSNSNPPPVDTGAAARHRNRFGNRNVENSAVTSNIESPTQILDNPPVVDAFGDFSRRVDKPDPSVVRTAISGRSSKKQ
PPSQSVQDMAPIAKKLSKKLPAKVIEDKRRPSPKNRNHLKRRGDMRPDKKPLPDVPMMQDIPLDKNDPSMVDMAMSGQPA
DPGSNIPAQNEAMSNVVILFNDNLGSQNLPASMLNWLMSGLLSDMTGVPVQSMDKQP

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