Gene
| Gene Model ID | pfu_aug1.0_343.1_15009 |
|---|---|
| Locus | scaffold343.1 : 95993 ... 105812 : - |
| To GenomeBrowser | scaffold343.1:95993..105812 |
| Genes list of scaffold | scaffold343.1 |
| Synonym | pfu_aug2.0_55.1_16805 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_343.1_15009.t1 | 1 | 1 | ADAM_spacer1 | 1 | 74 | 1.9e-12 | 47.0 | 5.8e-16 | 2.8e-12 | 46.4 |
| pfu_aug1.0_343.1_15009.t1 | 3 | 1 | TSP_1 | 264 | 285 | 1.1e-10 | 41.4 | 4.4e-05 | 0.22 | 11.6 |
| pfu_aug1.0_343.1_15009.t1 | 3 | 2 | TSP_1 | 320 | 375 | 1.1e-10 | 41.4 | 4.9e-10 | 2.4e-06 | 27.5 |
| pfu_aug1.0_343.1_15009.t1 | 3 | 3 | TSP_1 | 381 | 431 | 1.1e-10 | 41.4 | 1.5e-06 | 0.0073 | 16.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_343.1_15009.t1 | gi|321477616|gb|EFX88574.1| | hypothetical protein DAPPUDRAFT_191054 [Daphnia pulex] | 5.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_343.1_15009.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_343.1_15009.t1 ccatgagaaaatccgacggaagttacattttcaacgggaacttccggttaagttcccatggcgactacaaaaaggcggga acaactttcaaatacagacgtaaccaaggtcccggatgtccaggagaatgtgtgcatgctgaaggtccagtaaacaatac gatagatgtactggtgctatcctacagaaggaatcctggaataatatatcaattcacagtcccaaaacacatgtccaaag acgccatgaccagaatcataccgcgtcttcgactgaacggctctagaaacggtcctccgtataaccaacccaccctacag aggaaaaatgacgtcagagtgaatcagatccatccttctaggaattctactgcaaaagacgatataaatgacagaaaaac tcagcgagttgcactgagacagagtccagtttacgttccttcacgaacagacactcagtctgcacagagtttgacgctgg atgggcgtggtttgtcgtctgccgaccgagcttcctctgcttacgatccgtacaggggttattacgatgtgaatcggtgg agaggaagtggagggaaccaaagacaagctctgacagctcagtatggccgtcagtataacaccgcgcgtgctgtaggcga tcagaatggcatcccattggctgttcccctgggcggaagtataaacaccggaaacggaattccactaagtaataacatac caggatccggtcagcgattatccgcacagaatatacctgatggggttaacttcatatggaaactgtctggattcacagag tgctcgaggacgtgcggaggaggaatccaacaagcaaaagctgtctgcatgtcacgtgactcgtatatcgtagtcacgga cgataattgtgttccgtcagacaaaccgaagttgcaaactgtaaggtgtaatacgaggatttgtccccctggttggacaa ctggtgagtggtcgtcatgtagcgtatcatgtggtcgtggcgtacagagcagagacgtactgtgtaaacaaacagtgtca tcacggcaggagatttcgttaccgtcatcaaggtgtggtagacgggatcgaccggtatcagtacagacatgtaccggaaa accgtgtgcgtcgtgggaagtgggtgactggaagaagtgtacgacagactgtggacgaggtcactacacgagaactgtgt actgctctgcaaaagacggtaccccattggatgagaagaaatgcaacggctcaagaccacgtgacaggaagccgtgtaaa aataaacatccatgtggagggtactggttcgaaggtccttggtcgtcgcatcatttaagaacagataaattggcagcatg gaccagacatgcacgttttgggtactcaacctaa |
|
Protein
| Protein ID | pfu_aug1.0_343.1_15009.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_343.1_15009.t1 MRKSDGSYIFNGNFRLSSHGDYKKAGTTFKYRRNQGPGCPGECVHAEGPVNNTIDVLVLSYRRNPGIIYQFTVPKHMSKD AMTRIIPRLRLNGSRNGPPYNQPTLQRKNDVRVNQIHPSRNSTAKDDINDRKTQRVALRQSPVYVPSRTDTQSAQSLTLD GRGLSSADRASSAYDPYRGYYDVNRWRGSGGNQRQALTAQYGRQYNTARAVGDQNGIPLAVPLGGSINTGNGIPLSNNIP GSGQRLSAQNIPDGVNFIWKLSGFTECSRTCGGGIQQAKAVCMSRDSYIVVTDDNCVPSDKPKLQTVRCNTRICPPGWTT GEWSSCSVSCGRGVQSRDVLCKQTVSSRQEISLPSSRCGRRDRPVSVQTCTGKPCASWEVGDWKKCTTDCGRGHYTRTVY CSAKDGTPLDEKKCNGSRPRDRKPCKNKHPCGGYWFEGPWSSHHLRTDKLAAWTRHARFGYST |
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