Gene
| Gene Model ID | pfu_aug1.0_3434.1_23319 |
|---|---|
| Locus | scaffold3434.1 : 42054 ... 68765 : - |
| To GenomeBrowser | scaffold3434.1:42054..68765 |
| Genes list of scaffold | scaffold3434.1 |
| Synonym | pfu_aug2.0_388.1_27334 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3434.1_23319.t1 | 4 | 1 | Myosin_tail_1 | 129 | 227 | 3.0e-06 | 25.3 | 4.0e-10 | 3.0e-06 | 25.3 |
| pfu_aug1.0_3434.1_23319.t1 | 4 | 2 | Myosin_tail_1 | 221 | 381 | 3.0e-06 | 25.3 | 0.01 | 76.0 | 0.8 |
| pfu_aug1.0_3434.1_23319.t1 | 4 | 3 | Myosin_tail_1 | 469 | 580 | 3.0e-06 | 25.3 | 0.00016 | 1.2 | 6.7 |
| pfu_aug1.0_3434.1_23319.t1 | 4 | 4 | Myosin_tail_1 | 887 | 908 | 3.0e-06 | 25.3 | 0.039 | 290.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3434.1_23319.t1 | gi|327263361|ref|XP_003216488.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3434.1_23319.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3434.1_23319.t1 atggattctttgacaacaaagagttctgtagtggatgttgatatagaccagagaagtgaatctcagatgagtggtattga tagagagaaaggggaccaaacacctaaaccatacatgaaatcagatgataccatccatggagtgacaccagactggaaaa tgtctttctcccgttcccctggctcagaagatgttggtaaatatagattggagaacaaccaactaaggcttcaggtcaaa caacttaatatggaactacagtcagaacaaggattccgcaaaaagttaactgaatattgtactatacatgtatgtactaa aaacattatgaagaaattgcttacattttttgctgtcattaatttcagtgccatttccgagttctctgaaaagatacagc agctagagggcgacagaaaaaatcagacagaaaatcttcgtcgaacactaacggaaattgaatatgccaaggagagagaa gataggcttaagaaagatttagagttgcgtgtacgtgacttagaaggagcattagaagtagaaaagtcagccaatgatga ggccaataaagccatagacagactgacaaagcaaatcaaagagctggaaacatcatacgaggaggagagaaagaatggaa gggacctatcaattaaactggaaaaagttgaaagggaatattcgtcagtgaagagacagctgacatcagaggtggacaac aagaaaaatgtgatcggtaatctgtcaaaggaactggaagtacaccagaaaaactttaatgaactcaaagaggagttgtc taaggctaaaaagaggcagatatacttagaggagacttatgggggtagcatgagggagctagagttattattagataact tccaggtggatccaaaggcgagcctcaagtcaagtacaggatcaagaggaaagaaagaaagttccaaggcgccggcaccg tccgctgtactagaatctctgagaataacgttaatggagtataaaaaacgattagatgatacaacagaggaggatgcaca gaagaattacacacggacggcaaaagagttaaacagaatcagaagtgagtatggtgaattagagagcagtatgactaagc taaaactgaacctacagagtaccagtactaactctaataaagataggaagaggatccaggaactgtctgaggagataatg aaacttgtgaagaggcacaaggcagatgatgaggagaaaatggcataccttcatggaatgtaccagagacttctagctgg acgtgtcatggtgtcaaccaaggaccctggtgtccaacagtttacatgggctgacttgacgagtctagtatatgaacaga tgtgtcaattggtcactagtgtccaaaggtccgaggagaagataagacacttagaggaggccttaagaaccaaggaggaa tcggtggaggagatgcagaaatctcatgaggaccagctgaacaaactaacggccttgaccaaagaacgggaattgtcatg gcagaaacaaaaggaagagatagaggctcactactcacaacttctatctgaggtccagtcaaggtctaagaaaagtcagg caatggctgatcaagcttgggagaagatacgtatgacaggatcagtacaacaaggactggaaaccgagtgtcatgatctc cgcagtcagacactagaggcccagaggcagagtaaagctctactagccacctgtagtctactggcaggtgccctgtatcc taccttctcacggcagaattacctgtctcagcagaggaagatgttagaggatcagataaacagctgggagttctgtaggg agaggatggaattgctagtcggcacactgagctcggaaatgaaggcagttgaagaacaaagacttaacgaaccgagtaag ctggagaaaccagccaagagacatccattgttaacgtttaggataggggctgtggcagtgattgccgctaacaggttacg atacttgggacgaggaaataataggttgtttgtgacttatgatgctggtgtgtcaaatcaaacgggtattgttgtgtgta caggtggagttaaaccagtttccagagaattctcaggtattagggacgagacagatacagaatctgagcaaagggaaatc cagatggcagcactgaaatggatgtccagctcagagttactgtctaccgttatgtcttccatgtctgaccttctggaggt catggatggtatcaaggagaaagataaagctagtccaggtgaatgcagagctctggtgaatgcagccaggaattccttca ctaagttagtggataaaatgtgtcggcactttgatggtacgtccggacagccatcagtcagtaacagggatagaaactca ctagcccggcagattaataggggattggccaaggtgtgcatgggtaaaacgcttgaacagaaaaggcagatggcacctgt tcatgccaaaaaagagttagctttagcgagaggttttggaggacaagattccacactatcaaagatcttacttagctcgg actttattcctacagatgttggtaaagctggtccggagctcattgcttgccagaatctggtgggagcttttgtggatgct cagaaccaggcttactctaaaataagagctctggaaaacgaagtggagagtcatcgtcaacatataggaactctaaaacg ggaacttgcggacgcagtacgcagggaatatgaagagcagcctgaaattcctacaaaagatgtaaacagaagtcatagta acaacacactacgagatccagatatgaccagtagtgagagtttcatgcccatcaaggaggattcagagatgtctttcatg gtatctaaaccagccacacccaaagcccggttgtatggggaatcacccaaaaaatctgacaggtatgtggttcgacaatg taaagcatgttctatacattcggagtga |
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Protein
| Protein ID | pfu_aug1.0_3434.1_23319.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3434.1_23319.t1 MDSLTTKSSVVDVDIDQRSESQMSGIDREKGDQTPKPYMKSDDTIHGVTPDWKMSFSRSPGSEDVGKYRLENNQLRLQVK QLNMELQSEQGFRKKLTEYCTIHVCTKNIMKKLLTFFAVINFSAISEFSEKIQQLEGDRKNQTENLRRTLTEIEYAKERE DRLKKDLELRVRDLEGALEVEKSANDEANKAIDRLTKQIKELETSYEEERKNGRDLSIKLEKVEREYSSVKRQLTSEVDN KKNVIGNLSKELEVHQKNFNELKEELSKAKKRQIYLEETYGGSMRELELLLDNFQVDPKASLKSSTGSRGKKESSKAPAP SAVLESLRITLMEYKKRLDDTTEEDAQKNYTRTAKELNRIRSEYGELESSMTKLKLNLQSTSTNSNKDRKRIQELSEEIM KLVKRHKADDEEKMAYLHGMYQRLLAGRVMVSTKDPGVQQFTWADLTSLVYEQMCQLVTSVQRSEEKIRHLEEALRTKEE SVEEMQKSHEDQLNKLTALTKERELSWQKQKEEIEAHYSQLLSEVQSRSKKSQAMADQAWEKIRMTGSVQQGLETECHDL RSQTLEAQRQSKALLATCSLLAGALYPTFSRQNYLSQQRKMLEDQINSWEFCRERMELLVGTLSSEMKAVEEQRLNEPSK LEKPAKRHPLLTFRIGAVAVIAANRLRYLGRGNNRLFVTYDAGVSNQTGIVVCTGGVKPVSREFSGIRDETDTESEQREI QMAALKWMSSSELLSTVMSSMSDLLEVMDGIKEKDKASPGECRALVNAARNSFTKLVDKMCRHFDGTSGQPSVSNRDRNS LARQINRGLAKVCMGKTLEQKRQMAPVHAKKELALARGFGGQDSTLSKILLSSDFIPTDVGKAGPELIACQNLVGAFVDA QNQAYSKIRALENEVESHRQHIGTLKRELADAVRREYEEQPEIPTKDVNRSHSNNTLRDPDMTSSESFMPIKEDSEMSFM VSKPATPKARLYGESPKKSDRYVVRQCKACSIHSE |
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