Gene
| Gene Model ID | pfu_aug1.0_3434.1_23320 |
|---|---|
| Locus | scaffold3434.1 : 75576 ... 87624 : + |
| To GenomeBrowser | scaffold3434.1:75576..87624 |
| Genes list of scaffold | scaffold3434.1 |
| Synonym | pfu_aug2.0_388.1_27333 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3434.1_23320.t1 | 1 | 1 | NEP | 1 | 52 | 2.9e-20 | 72.1 | 4.6e-24 | 3.4e-20 | 71.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3434.1_23320.t1 | gi|260802128|ref|XP_002595945.1| | hypothetical protein BRAFLDRAFT_178924 [Branchiostoma floridae] | 5.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_3434.1_23320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3434.1_23320.t1 atgaacatcgtagccaatgagccatcattagcattctttaggatacaagagcatgttaggaagtccctaccgcagcttgt agaacaaaagcatgaagtactagaaacccaacagcttgtccaaggagcaagttttgatacagagtatgccaacaagggtg ccgtatcacaaaccaaccctttcgtgtacagggtaaagggtcccccacagaacaacgagtcgagatttgctctttga |
|
Protein
| Protein ID | pfu_aug1.0_3434.1_23320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3434.1_23320.t1 MNIVANEPSLAFFRIQEHVRKSLPQLVEQKHEVLETQQLVQGASFDTEYANKGAVSQTNPFVYRVKGPPQNNESRFAL |
|