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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_34340.1_62783
Locus scaffold34340.1 : 1 ... 5620 : +
To GenomeBrowser scaffold34340.1:1..5620
Genes list of scaffold scaffold34340.1
Synonym pfu_aug2.0_1493.1_11699

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_34340.1_62783.t1 2 1 SGL 4 64 7.7e-10 38.5 2.8e-13 1.4e-09 37.7
pfu_aug1.0_34340.1_62783.t1 2 2 SGL 52 79 7.7e-10 38.5 0.0016 7.8 5.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_34340.1_62783.t1 gi|266618625|pdb|3HLH|A Chain A, Diisopropyl Fluorophosphatase (Dfpase), Active Site Mutants 1.0e-31

Transcript
Transcript IDpfu_aug1.0_34340.1_62783.t1
Definition-
>pfu_aug1.0_34340.1_62783.t1
gaactctggagggcggaccagatggcatggactttgacgaggacgacaatcttttggtagctcactggggatcaggtcat
atcgaggtatttggtagggatggaggagagccccacaccagaatcaagtgtccctttgatcgacccagcaacttacattt
caaaaaagggaccaagactgtgtacgtcacagagcatgattctcatgccttgtggaaatttgattggaaaagaggaggga
aaccacagttttgtgatacataa

Protein
Protein IDpfu_aug1.0_34340.1_62783.t1
Definition-
>pfu_aug1.0_34340.1_62783.t1
TLEGGPDGMDFDEDDNLLVAHWGSGHIEVFGRDGGEPHTRIKCPFDRPSNLHFKKGTKTVYVTEHDSHALWKFDWKRGGK
PQFCDT

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