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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3444.1_37590
Locus scaffold3444.1 : 13976 ... 16349 : +
To GenomeBrowser scaffold3444.1:13976..16349
Genes list of scaffold scaffold3444.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3444.1_37590.t1 1 1 Pkinase 2 78 1.0e-14 54.3 2.1e-18 1.1e-14 54.2
pfu_aug1.0_3444.1_37590.t1 1 1 Pkinase_Tyr 2 78 4.7e-11 42.2 1.1e-14 5.3e-11 42.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3444.1_37590.t1 gi|195450116|ref|XP_002072371.1| Pk92B [Drosophila willistoni] 8.0e-32

Transcript
Transcript IDpfu_aug1.0_3444.1_37590.t1
Definition-
>pfu_aug1.0_3444.1_37590.t1
atggtgctgggtcggggaacgtacggaatcgtgtacgccgctcgtgacctcaaaacacaagtcaggattgccgtcaagga
agtgcccgagaaacaaacacaggaagtacaacccctacatgaagaaatcaaactccacagtcgtctgagtcatcgtaata
tagttaagtatctgggatctgtcagtgaagatggatactttaaaatcttcatggagcaagttcctggaggtcagtctaaa
tttaaattctaa

Protein
Protein IDpfu_aug1.0_3444.1_37590.t1
Definition-
>pfu_aug1.0_3444.1_37590.t1
MVLGRGTYGIVYAARDLKTQVRIAVKEVPEKQTQEVQPLHEEIKLHSRLSHRNIVKYLGSVSEDGYFKIFMEQVPGGQSK
FKF

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