Gene
| Gene Model ID | pfu_aug1.0_3444.1_37591 |
|---|---|
| Locus | scaffold3444.1 : 20198 ... 35445 : - |
| To GenomeBrowser | scaffold3444.1:20198..35445 |
| Genes list of scaffold | scaffold3444.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3444.1_37591.t1 | 2 | 1 | C1q | 40 | 120 | 2.9e-37 | 127.4 | 3.0e-16 | 1.5e-12 | 47.6 |
| pfu_aug1.0_3444.1_37591.t1 | 2 | 2 | C1q | 125 | 249 | 2.9e-37 | 127.4 | 2.6e-27 | 1.3e-23 | 83.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3444.1_37591.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3444.1_37591.t1 atgcaaagtagaaaatctaacaaaaatattcacatcttgcaaagaagacaggtattgaagcataagtttgcatttttctt cgacaaaccagataaaccaaacagtaaaccaatagtggccttcggtgcctacccaagcaaaaacctgcagaaaattgcaa aatataccaaggtagtatttgggagcattcgtaccaatatcggtaatgcctataacccaaacactgggatcttcacagca cccacagatggagtgtatgcttttcatatggcaataacagttgctcctcagaagtatacagtcatctacatgcaagtcag tggtatttacaaagcgtttgtgtatgataaaccaaacggtcaaccaagagttgccttcagtgcctatccaagcaaaaacc tacagaaaatatcaaaacatacaaagatagtatatgacggtgtggttactaatatcggtaatgcctataaccctaacact gggatcttcacagcacctatagatggtgtgtatgctttccatatggcattaacagttgctacagggacgtattcagtcat ctacatccaagtcaatggtaataacaaagcgttcgtgtattgtaatgctagaagttatgcaacttggtattctgccagcc aatcctacgtaactgatcttaaaaaaggggacaaggttaaccttgcaacagcaaatactgttgcagattacatccatggc tactctactttcactggatacagattgtag |
|
Protein
| Protein ID | pfu_aug1.0_3444.1_37591.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3444.1_37591.t1 MQSRKSNKNIHILQRRQVLKHKFAFFFDKPDKPNSKPIVAFGAYPSKNLQKIAKYTKVVFGSIRTNIGNAYNPNTGIFTA PTDGVYAFHMAITVAPQKYTVIYMQVSGIYKAFVYDKPNGQPRVAFSAYPSKNLQKISKHTKIVYDGVVTNIGNAYNPNT GIFTAPIDGVYAFHMALTVATGTYSVIYIQVNGNNKAFVYCNARSYATWYSASQSYVTDLKKGDKVNLATANTVADYIHG YSTFTGYRL |
|