Gene
| Gene Model ID | pfu_aug1.0_3449.1_08620 |
|---|---|
| Locus | scaffold3449.1 : 12866 ... 18575 : - |
| To GenomeBrowser | scaffold3449.1:12866..18575 |
| Genes list of scaffold | scaffold3449.1 |
| Synonym | pfu_aug2.0_972.1_08051 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3449.1_08620.t1 | 1 | 1 | Neur_chan_LBD | 27 | 201 | 1.30321e-43 | 148.6 | 0.0 | 2.20004e-43 | 147.9 |
| pfu_aug1.0_3449.1_08620.t1 | 2 | 1 | Neur_chan_memb | 216 | 310 | 5.9e-23 | 81.9 | 3.0e-19 | 8.8e-16 | 58.5 |
| pfu_aug1.0_3449.1_08620.t1 | 2 | 2 | Neur_chan_memb | 296 | 335 | 5.9e-23 | 81.9 | 3.5e-10 | 1.0e-06 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3449.1_08620.t1 | gi|348538138|ref|XP_003456549.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 3 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3449.1_08620.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3449.1_08620.t1 atgtctagattcctagtttccatggtagctgtgtgtgtgttaatacagcatggagacgccaaatttccaagcgaagatca gttggctgatttattcaaagattacaattccaatattccaccaacatataatggtacagccgttcatgacaacttacagc tgtacatccttagtattgattccataagtgactcaagtatggactattcaatgagcttttatttccgacaatcatggaca gacctccgcctccggtataactttactaacgttgacgtactggagatagacacgaagatgattagtgacctctggttacc ggatgtttacatcatcaatgaaaagagggcaagcttccatgacatcactgtgccgaacaaactcataaacatataccccg atggcagagtattctacagtgccaggataacagggaccttcacgtgtagcatggatcttcacaagtatcccttagacaga caaatctgtgatataaaatttgaaagctattcctttagtgcaaagacaattgtcatccggtggcaaccagaagcttcaat attaaaagacggtcttcagctgccgcagttcaatcttaccaagcgatcagcatttacatgtgatggcatttactacggag gcttactcaccgtccttactatgtctacccagagtgcctcggcgttgtctaatctacagaaaatatcctatgtaaaggct ttggatgtgtggcttgcggtgtgtctggtatttgtatttggcgcccttattgaattcgcctatgttaacgttacggcgag agttgaacaacgcagaaagatggcgtataccgtaatgtcaaaattccttgaaaaaaggaagaaaagtaaagaggaggaaa atggtaataacgaaaagggcaaaaagagcaatgacaagaagaaaaaggagaaatcccgacaaatagacagaatttcaaga attgcatttccagttgtatttttgattttcaacattgcttattggactttttatcttgtttgggaaccagtagaaggatg a |
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Protein
| Protein ID | pfu_aug1.0_3449.1_08620.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3449.1_08620.t1 MSRFLVSMVAVCVLIQHGDAKFPSEDQLADLFKDYNSNIPPTYNGTAVHDNLQLYILSIDSISDSSMDYSMSFYFRQSWT DLRLRYNFTNVDVLEIDTKMISDLWLPDVYIINEKRASFHDITVPNKLINIYPDGRVFYSARITGTFTCSMDLHKYPLDR QICDIKFESYSFSAKTIVIRWQPEASILKDGLQLPQFNLTKRSAFTCDGIYYGGLLTVLTMSTQSASALSNLQKISYVKA LDVWLAVCLVFVFGALIEFAYVNVTARVEQRRKMAYTVMSKFLEKRKKSKEEENGNNEKGKKSNDKKKKEKSRQIDRISR IAFPVVFLIFNIAYWTFYLVWEPVEG |
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