Gene
| Gene Model ID | pfu_aug1.0_3449.1_08621 |
|---|---|
| Locus | scaffold3449.1 : 25088 ... 28226 : - |
| To GenomeBrowser | scaffold3449.1:25088..28226 |
| Genes list of scaffold | scaffold3449.1 |
| Synonym | pfu_aug2.0_972.1_08050 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3449.1_08621.t1 | 2 | 1 | Neur_chan_memb | 14 | 96 | 1.9e-27 | 96.7 | 2.2e-25 | 1.6e-21 | 77.2 |
| pfu_aug1.0_3449.1_08621.t1 | 2 | 2 | Neur_chan_memb | 115 | 152 | 1.9e-27 | 96.7 | 3.1e-08 | 0.00023 | 21.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3449.1_08621.t1 | gi|396716|emb|CAA50492.1| | gamma-aminobutyric acid-grated chloride-ion channel/receptor, zeta subunit [Lymnaea stagnalis] | 7.0e-27 |
Transcript
| Transcript ID | pfu_aug1.0_3449.1_08621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3449.1_08621.t1 atgaatctgagtcggaacacaggatactacatatcgcatgtgtacctaccatgcatattggtcgtcatactatcctggat cagtttctggtttggaacagacgctatattaccccgtctctccctgggcgtggtcacagtcctcacaatgatggtcatta gtgccttgaccaatgcagacctcccgaaagtatcttattctacccttctggacgtctggttggctgtgtgcaatatattt gttttcgtagctttcctagaattcgtcttaatgcacctctggcttagagactgcaaacaagggaggcaaaccctgatggc cgatggaggaactggaaaagcagaggaattcaacgacgccgagtcgagtcagacgcagaacaaggctggaaaggtggata tgatttgtagactgttgttcccagtggtctttgctgttttcaatattgcatattggatcttttgtgcagcatag |
|
Protein
| Protein ID | pfu_aug1.0_3449.1_08621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3449.1_08621.t1 MNLSRNTGYYISHVYLPCILVVILSWISFWFGTDAILPRLSLGVVTVLTMMVISALTNADLPKVSYSTLLDVWLAVCNIF VFVAFLEFVLMHLWLRDCKQGRQTLMADGGTGKAEEFNDAESSQTQNKAGKVDMICRLLFPVVFAVFNIAYWIFCAA |
|