Gene
| Gene Model ID | pfu_aug1.0_345.1_58087 |
|---|---|
| Locus | scaffold345.1 : 101297 ... 103745 : - |
| To GenomeBrowser | scaffold345.1:101297..103745 |
| Genes list of scaffold | scaffold345.1 |
| Synonym | pfu_aug2.0_824.1_14589 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_345.1_58087.t1 | 1 | 1 | TIR | 447 | 567 | 2.2e-22 | 78.9 | 2.3e-25 | 4.2e-22 | 78.1 |
| pfu_aug1.0_345.1_58087.t1 | 1 | 1 | TIR_2 | 448 | 558 | 2.7e-14 | 53.1 | 2.8e-17 | 5.3e-14 | 52.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_345.1_58087.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_345.1_58087.t1 atggctaatgaacgaacaacggagacgtatgatctccttccaatgggatgggacaagttttgttacagaaaaacaaacgg attagacacaaatgatcgtttggattacaaatgtattatagacggagagtcgtccggactatgggagttagaaacgttac ggaattggacggataatttcaacatcaattacactatggatattgaatgtaaagaagacagtaatgtttcactaccttgg ccaatgaaggcaatgaacttaatagaactccgagtcacaaactgtattgtgttggattatttcaaggatttcggcaatcc catgttggattctacaccggatcagctgatagttctggatttatcaaacatacacgtcattatacgtctgagtgagatgc tggcagtggccaacacaatagatacggtaaacaaagactatcaatgtgggtgtgaggatacagtacaacgatatatatcc aggaatattacttacggcttccatcaagagatcatgtccggtatgagttctgacaaaggcttagagatcatgcaggcagg agacaggtttctggccaagaccaggaatatcccgtacaactgtgtatacaaacggcttacttattatgatcagagtatta gtgcctcaaaagctaaactgttcatggagctgtccacagataattcacggtaccctgtactccggttttacaacctctct cgtatcggcgtggacagaatccaccaacaagtgatgcggtggtaccggtattttgataagttagagtacatggatttgtc cagaaataagataaccgagctccagtttgaagactcggtgaaagcttacgaaggagattatccagattttacactagatc tgagttataacaagatatcggaaatcaccgcacaacacatcgagaggttgtctaaaataccaaacatgtttattgatcta aaggaaaaccctatcaattgttcttgtagtgaggacgttaaacatttactgaagcttattcacaacaagggagtttggaa aaaggaatcttacaagagatatgaatatgtcaaagtgttacgatgtaacgaaccagtaaaattggaaggaaagacattga tatcaattacagagaatgatctactgtgtgaggtagatgtggaatacgtcgtagattacgcatcaatcatcagtcttagc gtatttgcattatttctgatcatcatcattatcatccttgcaaaatttaggcgggaaattcgaattttgacatacacgcg tttccatatcattctgccttgtcaaagtgaacttctgtacgaaaacaaaagatatgacgcgttcgtatcttacagtagtg cggaccaagaatgggtgtctaaaaccttcgaggatatggaggaatcaaagaacgaatcgatgagcaagtttaggttttgt ttgcatcaccgcgactttattcccggtaaaacaatatttgataatgtaatagacagcgtggaaacaagtagacatacagt cattgttttatccaggaactttttgaacagccactattgtatgtacgagtttcacgaggctttccaacagagcatcatag agcgcaagaaacatcttattgtcatattattggaagatataccgacaaacgaactccctaaagatctcaaaagatgtctc aaaacatttacgtacatccgaaaagatgacatgatttttgaagaccgtcttgtatttgcactttcttacaaaagcaataa acggttgaccagccgaagcgatagtgaaagcacatcaagaacaatgaacagtcagatatcacgtgagactgacgtcacat ccgacggaaacatgagtccctccgttatctccacagatagtgtttttccgccgattattacgcctgacgattttcttgga aagacacaaaagtgtgagaatcatttgtaa |
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Protein
| Protein ID | pfu_aug1.0_345.1_58087.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_345.1_58087.t1 MANERTTETYDLLPMGWDKFCYRKTNGLDTNDRLDYKCIIDGESSGLWELETLRNWTDNFNINYTMDIECKEDSNVSLPW PMKAMNLIELRVTNCIVLDYFKDFGNPMLDSTPDQLIVLDLSNIHVIIRLSEMLAVANTIDTVNKDYQCGCEDTVQRYIS RNITYGFHQEIMSGMSSDKGLEIMQAGDRFLAKTRNIPYNCVYKRLTYYDQSISASKAKLFMELSTDNSRYPVLRFYNLS RIGVDRIHQQVMRWYRYFDKLEYMDLSRNKITELQFEDSVKAYEGDYPDFTLDLSYNKISEITAQHIERLSKIPNMFIDL KENPINCSCSEDVKHLLKLIHNKGVWKKESYKRYEYVKVLRCNEPVKLEGKTLISITENDLLCEVDVEYVVDYASIISLS VFALFLIIIIIILAKFRREIRILTYTRFHIILPCQSELLYENKRYDAFVSYSSADQEWVSKTFEDMEESKNESMSKFRFC LHHRDFIPGKTIFDNVIDSVETSRHTVIVLSRNFLNSHYCMYEFHEAFQQSIIERKKHLIVILLEDIPTNELPKDLKRCL KTFTYIRKDDMIFEDRLVFALSYKSNKRLTSRSDSESTSRTMNSQISRETDVTSDGNMSPSVISTDSVFPPIITPDDFLG KTQKCENHL |
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