Gene
| Gene Model ID | pfu_aug1.0_3450.1_51987 |
|---|---|
| Locus | scaffold3450.1 : 20886 ... 29046 : + |
| To GenomeBrowser | scaffold3450.1:20886..29046 |
| Genes list of scaffold | scaffold3450.1 |
| Synonym | pfu_aug2.0_254.1_13872 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3450.1_51987.t1 | 1 | 1 | TMEM173 | 50 | 147 | 1.3e-28 | 99.7 | 1.1e-32 | 1.6e-28 | 99.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3450.1_51987.t1 | gi|291387441|ref|XP_002710295.1| | PREDICTED: stimulator of interferon genes protein isoform X2 [Oryctolagus cuniculus] | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_3450.1_51987.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3450.1_51987.t1 atggctgacgttgacgaccagcagcttcctcagccaatccgctttctcacttacatccatctgggtagagaaaaagaata ttttcctaagcttgtggattgtttgagagcggactgtgaaagttgggaatctctgcttccggctggcaatgttgcacacg gcctggcgtggagttattacttcggatacctaaaagtcctgttaccaggtatagacaacagaatcgaacgttcagaatgg tgggggagtagacaagacagtcgaatgatgagcagaaagttatatctcctgttccctgtaagctgtatgtgcaaggacac actctgcgatgacgatgactccataacccatgctggacatctagagacgatcgttagaaacagagctggaacagtgggaa ggtcctaccaaagtactgtctataagattactgatcatgatatgaaatactgtaaagagttggaacatttacatattatt attactggttatgatgatattaagaaaggggataacacaaaacggcataactag |
|
Protein
| Protein ID | pfu_aug1.0_3450.1_51987.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3450.1_51987.t1 MADVDDQQLPQPIRFLTYIHLGREKEYFPKLVDCLRADCESWESLLPAGNVAHGLAWSYYFGYLKVLLPGIDNRIERSEW WGSRQDSRMMSRKLYLLFPVSCMCKDTLCDDDDSITHAGHLETIVRNRAGTVGRSYQSTVYKITDHDMKYCKELEHLHII ITGYDDIKKGDNTKRHN |
|