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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_34508.1_48158
Locus scaffold34508.1 : 526 ... 6696 : +
To GenomeBrowser scaffold34508.1:526..6696
Genes list of scaffold scaffold34508.1
Synonym pfu_aug2.0_62.1_06855

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_34508.1_48158.t1 1 1 ADH_N 31 141 1.0e-26 92.8 8.3e-31 1.2e-26 92.5

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_34508.1_48158.t1
Definition-
>pfu_aug1.0_34508.1_48158.t1
atgtctggaaagactatgaaagctttggtaaagacgaaagaagggaagtcatttgagtataaagaagtgcccattccgga
accacaaggagatgaagtgttgatcaaagtcgatgcagtttccgtttgtggctcagatataaacttatacacatggaacc
aagtggctcaggttatagcttcgattcccttcacccccgggcatgaatgtgcaggtacagtggtgaaatgtggtcctgat
gcgaaactggccattggagccaaggtgggggtggagaaccattactactgtggtgattgttatcagtgttttgatgacac
tagggagatatgcaagtatatgggtcagtttggacacggtaaacaaacaccgtacgggggctgttcagaatacacgattg
tacctgcaaagtacctgtacgaactcaaacgaaatcttt

Protein
Protein IDpfu_aug1.0_34508.1_48158.t1
Definition-
>pfu_aug1.0_34508.1_48158.t1
MSGKTMKALVKTKEGKSFEYKEVPIPEPQGDEVLIKVDAVSVCGSDINLYTWNQVAQVIASIPFTPGHECAGTVVKCGPD
AKLAIGAKVGVENHYYCGDCYQCFDDTREICKYMGQFGHGKQTPYGGCSEYTIVPAKYLYELKRNL

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