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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3451.1_59244
Locus scaffold3451.1 : 18206 ... 23780 : +
To GenomeBrowser scaffold3451.1:18206..23780
Genes list of scaffold scaffold3451.1
Synonym pfu_aug2.0_2409.1_32181

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3451.1_59244.t1 1 1 7tm_1 21 265 6.5e-18 64.8 6.1e-22 9.1e-18 64.3

Transcript
Transcript IDpfu_aug1.0_3451.1_59244.t1
Definition-
>pfu_aug1.0_3451.1_59244.t1
atgttgacatttttcgaccatcagctttggaagatgtcatgtagtaggtatttagccatccgtgctttagctgacaatgg
ctttattctcacaataatgtttgtgtggttagatttcgtaaacataagagtatttcatactccggtcatctgccagatta
tattaactgcttcatatttttgcagcttcttatcagtttggtgtgtagtgtttgtcacatgtgaaaattacattcgtata
agacatcatactaaagtaaatcgattctgtaccgtgaaaagatcgatgcaagtactgatcggattttccattgttggaat
tgtaatatcttctttccctatatggactacagaggtggttcagataggcaacctcagctattgcattacaaaactaagtg
cagttcatgtgaatgcagaaagaatcttagtttacattgactctttcctaacactgctgcttcccatgattctggtcctc
gcaataatgtgtctaacgctgaagagtgccaaccaagcattaaaacgacatcgtcaaagacgccaaaacaacctggcaac
aatatcagagaacagaagacgccgaaggtcaccgcaaaatcaggtagccaaacttttaacaactgtgtcattactattta
tcattcttcacctgccgagtcacgtgatcagactgaaagtgatgattcaggacaaggtgttagagaattatgtcagtact
gacacagacagaactattcagcacgtgttttcagcaatgtactatctcaacttcgacattaactggatcgtgtatcttgt
aagtggagcgggttttcgacgcgtttttctgcggaaaatctgtaaatattctagtaaagaccaaccaaatgatatagatt
ctccacattttagtagatcaactctcggaagaaatttggtaaagtcacaaggtaatatcgaactgacgacaactcataag
actcaaggggaacaagtgataaatttgcctgatttgttaacgactgtaaattag

Protein
Protein IDpfu_aug1.0_3451.1_59244.t1
Definition-
>pfu_aug1.0_3451.1_59244.t1
MLTFFDHQLWKMSCSRYLAIRALADNGFILTIMFVWLDFVNIRVFHTPVICQIILTASYFCSFLSVWCVVFVTCENYIRI
RHHTKVNRFCTVKRSMQVLIGFSIVGIVISSFPIWTTEVVQIGNLSYCITKLSAVHVNAERILVYIDSFLTLLLPMILVL
AIMCLTLKSANQALKRHRQRRQNNLATISENRRRRRSPQNQVAKLLTTVSLLFIILHLPSHVIRLKVMIQDKVLENYVST
DTDRTIQHVFSAMYYLNFDINWIVYLVSGAGFRRVFLRKICKYSSKDQPNDIDSPHFSRSTLGRNLVKSQGNIELTTTHK
TQGEQVINLPDLLTTVN

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