Gene
| Gene Model ID | pfu_aug1.0_3451.1_59245 |
|---|---|
| Locus | scaffold3451.1 : 24406 ... 28854 : + |
| To GenomeBrowser | scaffold3451.1:24406..28854 |
| Genes list of scaffold | scaffold3451.1 |
| Synonym | pfu_aug2.0_51.1_03500 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3451.1_59245.t1 | 1 | 1 | rve | 363 | 470 | 2.5e-22 | 79.2 | 2.3e-25 | 6.8e-22 | 77.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3451.1_59245.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3451.1_59245.t1 atggccgaatcactacccgtatttccacagttcaaagtccatgcagaaggcgcagtgggcacacgatggagaaaatgggt acaacgcctggaaaatctgttcgtcgggatgaaaatttctgacaacaaaaggagacgtgcgttgctccttcattacgccg gtgaagaagtgtatgatatatttgacactttaacggataccggtaacgatgaaaattatgatcaagcaaaggaatgttta aagcaatacttcgagccaaaagtaaacaaagaatacgagagatacgtatttcggcagtcacaacaaaactcagatgaaac agtagaccagtaccatacaagactgagacagttggcaaataaatgtgaattcaacgacaacgagagcgaaataaaatcgc aaatcatacaaagttgcacatcaaataaattgagaaggaaagctctaagcgaggatatgacactggcaaaactgcttgag acagcacggacattcgagctagcagaaaaacaagcttcagggatagagaaaaaaatggcatcgggaaacgtgaataaaat caaaacaaaggaaaagaaatacgtggtgaaacaaaagagcagaccacagccgaaacgcagagatgagaaccccaaaacaa aatgttatttctgcggaggaagatatcctcacaaatatgaatgcccggcgaaagggaagacgtgctcaaactgccagaaa gaagatcattttgctgcagtatgccggtcaaagccgaggaaacaaacatgcaaaaagatcgagaattcgcaaacagacga aagcgaagacgaatacactttcagcgtaaaaggagcaaatcacgacgggaaagagttcttattacgtggatcacgactcg taataccattttctttacaaagaaaaatcgtcgaaatcgcacatgaaggacaccaggggatagtcaaaacgaaacaactt ctccgagaaaaagtttggtttcccggaatagatagtgccgtagaaaatttatgcagaagttgtgtgccatgcttagcaac aactccggaaaacaaaatcgaaccgctgaaaatgtcaccactaccagattcaccgtggaatgaagtaagcgtcgatttct gcggaccgttcccatcaggagactatttactcgttgttatagatgattattcacgatatccggaagttgaaatcgtacac tcgacatcagcaagaacaacgatgacccgacttgataaaatatttgctacacatggaatacctcaggtcgtaaaaacaga caacggacctccatttcaaagtcagcaatttcgggatttctcgaaatacatgggattcaaacacagaaaaatcacacctc tatggccaagggcaaatggagaagtggagagatttatgcgaacaataggaaaactaatcaaaacagcgaatatcgaaggg aaaaactggaaacaagaaatttatcaatttttgcgaaattacagagcaaccccacactctactacgggaataccaccagc cacagctctatttggaagaaatataacaatacgtattccggaagtaaatttcaaaaaggatgacacaaaaatcagacaga gagatcgaaagcaaaaagaaaagatgaaagcacatgctgataagaaaaaccaagcaaaaccgtcgaaactacaaaaagga gataccgtaattgtaaaacaaaagagagaaaacaaactgtcaccgccgtataacgaaaagccgctagaaatcatagaaaa caagggatctatgataacagcaggaaatgaagataaaacaattaccagaaattcaagtgcgtttaaagaggtaccgaaac ccgagatgaccgagataacggaaccgtctgatcccccagacgaaccacctgttagccgttataatttgcgtaaacaaatt acaccaccgaaatatctcgatgattatgtagtgaccggtatatcatcgtaa |
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Protein
| Protein ID | pfu_aug1.0_3451.1_59245.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3451.1_59245.t1 MAESLPVFPQFKVHAEGAVGTRWRKWVQRLENLFVGMKISDNKRRRALLLHYAGEEVYDIFDTLTDTGNDENYDQAKECL KQYFEPKVNKEYERYVFRQSQQNSDETVDQYHTRLRQLANKCEFNDNESEIKSQIIQSCTSNKLRRKALSEDMTLAKLLE TARTFELAEKQASGIEKKMASGNVNKIKTKEKKYVVKQKSRPQPKRRDENPKTKCYFCGGRYPHKYECPAKGKTCSNCQK EDHFAAVCRSKPRKQTCKKIENSQTDESEDEYTFSVKGANHDGKEFLLRGSRLVIPFSLQRKIVEIAHEGHQGIVKTKQL LREKVWFPGIDSAVENLCRSCVPCLATTPENKIEPLKMSPLPDSPWNEVSVDFCGPFPSGDYLLVVIDDYSRYPEVEIVH STSARTTMTRLDKIFATHGIPQVVKTDNGPPFQSQQFRDFSKYMGFKHRKITPLWPRANGEVERFMRTIGKLIKTANIEG KNWKQEIYQFLRNYRATPHSTTGIPPATALFGRNITIRIPEVNFKKDDTKIRQRDRKQKEKMKAHADKKNQAKPSKLQKG DTVIVKQKRENKLSPPYNEKPLEIIENKGSMITAGNEDKTITRNSSAFKEVPKPEMTEITEPSDPPDEPPVSRYNLRKQI TPPKYLDDYVVTGISS |
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