Gene
| Gene Model ID | pfu_aug1.0_3454.1_08625 |
|---|---|
| Locus | scaffold3454.1 : 37426 ... 48863 : + |
| To GenomeBrowser | scaffold3454.1:37426..48863 |
| Genes list of scaffold | scaffold3454.1 |
| Synonym | pfu_aug2.0_4257.1_25917 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3454.1_08625.t1 | 2 | 1 | Pyr_redox_2 | 54 | 86 | 3.1e-22 | 79.4 | 3.9e-09 | 3.1e-06 | 27.2 |
| pfu_aug1.0_3454.1_08625.t1 | 3 | 1 | FAD_oxidored | 54 | 89 | 2.5e-06 | 26.8 | 3.2e-09 | 2.5e-06 | 26.8 |
| pfu_aug1.0_3454.1_08625.t1 | 2 | 1 | Pyr_redox | 55 | 120 | 2.9e-21 | 75.6 | 4.4e-06 | 0.0035 | 17.7 |
| pfu_aug1.0_3454.1_08625.t1 | 4 | 1 | Pyr_redox_3 | 56 | 77 | 2.1e-06 | 27.9 | 0.1 | 81.0 | 3.1 |
| pfu_aug1.0_3454.1_08625.t1 | 2 | 1 | K_oxygenase | 74 | 159 | 1.8e-06 | 27.1 | 5.1e-05 | 0.04 | 12.8 |
| pfu_aug1.0_3454.1_08625.t1 | 2 | 2 | Pyr_redox_2 | 96 | 278 | 3.1e-22 | 79.4 | 2.7e-17 | 2.1e-14 | 53.8 |
| pfu_aug1.0_3454.1_08625.t1 | 4 | 2 | Pyr_redox_3 | 102 | 153 | 2.1e-06 | 27.9 | 0.0074 | 5.7 | 6.9 |
| pfu_aug1.0_3454.1_08625.t1 | 2 | 2 | Pyr_redox | 146 | 222 | 2.9e-21 | 75.6 | 3.2e-19 | 2.5e-16 | 59.8 |
| pfu_aug1.0_3454.1_08625.t1 | 4 | 3 | Pyr_redox_3 | 148 | 181 | 2.1e-06 | 27.9 | 0.037 | 29.0 | 4.6 |
| pfu_aug1.0_3454.1_08625.t1 | 3 | 2 | FAD_oxidored | 148 | 183 | 2.5e-06 | 26.8 | 0.17 | 130.0 | 1.3 |
| pfu_aug1.0_3454.1_08625.t1 | 4 | 4 | Pyr_redox_3 | 187 | 249 | 2.1e-06 | 27.9 | 5.2e-07 | 0.0004 | 20.4 |
| pfu_aug1.0_3454.1_08625.t1 | 3 | 3 | FAD_oxidored | 191 | 234 | 2.5e-06 | 26.8 | 0.06 | 47.0 | 2.8 |
| pfu_aug1.0_3454.1_08625.t1 | 2 | 2 | K_oxygenase | 193 | 244 | 1.8e-06 | 27.1 | 8.3e-05 | 0.065 | 12.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3454.1_08625.t1 | gi|346472191|gb|AEO35940.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3454.1_08625.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3454.1_08625.t1 atgaatgcatcaattttacaaaatggatttttgtctgaccaactagaggtgcaacatggatgccgtcagggagaccctgt tgccctgtatatttttcttctatgtgcagaaatcctagcaatcttaattaaaaataacaaagatataaaagaagagaatg atctggttgttatcggttctggccctggaggttatgtagcagccatcaaagctgcccagctgggcatgaaggtaacacat gtacagggatttggtaaaatcacaggaccaaatgaagtgacagccataaaaagtgacggcacacaggagaaaatcctgac aaaaaatatattaatagcaactggatctgaagtcacgccttttccaggaattgaaatcgacgagaagactgtggtgtcat caacaggtgccctttcattagagaaagtcccagagaaaatgattgtaataggggccggcgtaataggagtagaactgggg tctgtttggcagcggttaggagctacggtcacatgtgtggaattcttaggtcatgtcggaggtatgggaattgacatgga cgtatcaaagaactttcagcgtattttacagaaacaaggacttaagtttaaattagacactaaagtgactagtgctagta aacaaggggataaaatcactgtttctgtggaaggagtcaaatctggaaaaaaagaggagttggactgtgatgtattactt gtgtgtatagggcgtcggccatacactgaggggctgggattagaggatgtgggtgtgcccagagacagtaggggtcgtgt agaggtcaactcacgattccagacctgtgtaccaaggtag |
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Protein
| Protein ID | pfu_aug1.0_3454.1_08625.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3454.1_08625.t1 MNASILQNGFLSDQLEVQHGCRQGDPVALYIFLLCAEILAILIKNNKDIKEENDLVVIGSGPGGYVAAIKAAQLGMKVTH VQGFGKITGPNEVTAIKSDGTQEKILTKNILIATGSEVTPFPGIEIDEKTVVSSTGALSLEKVPEKMIVIGAGVIGVELG SVWQRLGATVTCVEFLGHVGGMGIDMDVSKNFQRILQKQGLKFKLDTKVTSASKQGDKITVSVEGVKSGKKEELDCDVLL VCIGRRPYTEGLGLEDVGVPRDSRGRVEVNSRFQTCVPR |
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