Gene
| Gene Model ID | pfu_aug1.0_3457.1_59246 |
|---|---|
| Locus | scaffold3457.1 : 1 ... 10764 : + |
| To GenomeBrowser | scaffold3457.1:1..10764 |
| Genes list of scaffold | scaffold3457.1 |
| Synonym | pfu_aug2.0_692.1_07803 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3457.1_59246.t1 | 3 | 1 | MFS_1 | 5 | 93 | 3.4e-14 | 52.3 | 1.3e-10 | 9.6e-07 | 27.8 |
| pfu_aug1.0_3457.1_59246.t1 | 2 | 1 | Sugar_tr | 21 | 92 | 2.9e-06 | 26.1 | 3.9e-10 | 2.9e-06 | 26.1 |
| pfu_aug1.0_3457.1_59246.t1 | 3 | 2 | MFS_1 | 336 | 516 | 3.4e-14 | 52.3 | 2.7e-09 | 2.0e-05 | 23.4 |
| pfu_aug1.0_3457.1_59246.t1 | 2 | 2 | Sugar_tr | 387 | 560 | 2.9e-06 | 26.1 | 0.7 | 5200.0 | -4.4 |
| pfu_aug1.0_3457.1_59246.t1 | 3 | 3 | MFS_1 | 392 | 559 | 3.4e-14 | 52.3 | 5.3e-11 | 3.9e-07 | 29.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3457.1_59246.t1 | gi|72140929|ref|XP_788451.1| | PREDICTED: sodium-dependent glucose transporter 1 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3457.1_59246.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3457.1_59246.t1 ggtttatgcattgctattcctggaccaactttcatcgacctacaacaaaggatcgagtctgataccacacatacggcact gatatttacggcacgttcgatcggctaccttcttggatccctcgtcggtggatttttattcgactattttgacaagcagt tgatgttgacgatgactctatttatagcagctctcgccactgccataatcccgtggtccctgacgttaacggttctgtgt gtaatgtttgtccttcagggtacctccatgggcgtccttgatacagagaaaagtaagattgacaagaaaaacgataaacc tccccctccgaaaagtagtgatgccgatcaagtaaaaactaccacaagtagcgaggctgtcactccacccgccgattctc tgagtgtgaatgatactcacttagactcaaactctacagagcaagtagcaaatgtgagttcagatgagtcaaataattct aatacaacaacatttatgagtagtacatcgagtaatggtatatctaattcaactcagtcaacgactggtcagacctcatc gaagacgacaacaacgagggtgtcagatatagaaacatcacaagaacaacccactacaaccatattatcaacaacattgt taacaacgacaacagaaccaagtacaacaacaacaacaacatctacaacaaccactccaacaacaactaaaaaacccaca acgcctacaacaactacaacaacagttcaaactacgacaaaagtaccaacaacaactagtgctccaacaataacaacaag caaaccagaaactagagtaccaacaaagaaaccggattcctctgggtcatcaactaaaagtttgtcatctactacaacac aattgtcaaacaacaacgagacggaaatcactagtgaaaatcctgtaccatctaccactactaatgtgaaaaaaccaagt cattccatctctgggatcatcagtgcagtgaagaatatgtctcgcatacaatttgcctacctgatcattggagcattgtt gctgctcaattcgttcttgttcatggtactttactgctacgacagacatcgttcagactatagtagccttgttcaaaata agtatgaacaagatccgcaagaaatcctttgctgccgcatcatcatactcgttttgatgtttttgttctttttatcgtat gttggtatggaaacgacctttggaggcttgctaatgacctttgtcgtgactcatatccactggtccaagaatcaaggtgc tatagtgacagccatattctggggatcgttagcagtaggtaggggattttctatttttattgcgaactgttgtaaaccag gtctgatgctgatcacagacttagtacttctccttataggagctcttatgttaagttttggattaaaattccaatttgtc gtgtggttaggtacgttagccgtgggatttggtatgtcgtcaatatttcctacgtctatatcatggatggagcaatatta ccgattaactgggaaatccacagccgtactagtgatgggctctgcctttggtcagatgatcgttcctgtggtaacagggt atttttatcaaaatgtcgaacctatgtctctgatgtacgccctcttagtcttaagtgtgtttatgttagttttgtactcg gtgatgcagttggtggtatcgcgtaccgccaaaggagggaccgcatcccaaaatggtttcatgcatttacgcgatgatga taatttagagctagatgacatcagttacggaacgacacaagaatcgaccagacgcagattcatgccaacgttttcagatg aagcggaatacaacaagcttctgcaagatgaagatgacgatattgatttgcttggttag |
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Protein
| Protein ID | pfu_aug1.0_3457.1_59246.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3457.1_59246.t1 GLCIAIPGPTFIDLQQRIESDTTHTALIFTARSIGYLLGSLVGGFLFDYFDKQLMLTMTLFIAALATAIIPWSLTLTVLC VMFVLQGTSMGVLDTEKSKIDKKNDKPPPPKSSDADQVKTTTSSEAVTPPADSLSVNDTHLDSNSTEQVANVSSDESNNS NTTTFMSSTSSNGISNSTQSTTGQTSSKTTTTRVSDIETSQEQPTTTILSTTLLTTTTEPSTTTTTTSTTTTPTTTKKPT TPTTTTTTVQTTTKVPTTTSAPTITTSKPETRVPTKKPDSSGSSTKSLSSTTTQLSNNNETEITSENPVPSTTTNVKKPS HSISGIISAVKNMSRIQFAYLIIGALLLLNSFLFMVLYCYDRHRSDYSSLVQNKYEQDPQEILCCRIIILVLMFLFFLSY VGMETTFGGLLMTFVVTHIHWSKNQGAIVTAIFWGSLAVGRGFSIFIANCCKPGLMLITDLVLLLIGALMLSFGLKFQFV VWLGTLAVGFGMSSIFPTSISWMEQYYRLTGKSTAVLVMGSAFGQMIVPVVTGYFYQNVEPMSLMYALLVLSVFMLVLYS VMQLVVSRTAKGGTASQNGFMHLRDDDNLELDDISYGTTQESTRRRFMPTFSDEAEYNKLLQDEDDDIDLLG |
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