Gene
| Gene Model ID | pfu_aug1.0_3465.1_01461 |
|---|---|
| Locus | scaffold3465.1 : 27166 ... 39572 : + |
| To GenomeBrowser | scaffold3465.1:27166..39572 |
| Genes list of scaffold | scaffold3465.1 |
| Synonym | pfu_aug2.0_1242.1_08275 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3465.1_01461.t1 | 1 | 1 | Amidohydro_5 | 39 | 107 | 3.3e-13 | 49.2 | 1.8e-16 | 5.4e-13 | 48.5 |
| pfu_aug1.0_3465.1_01461.t1 | 2 | 1 | Amidohydro_4 | 64 | 148 | 1.7e-06 | 28.3 | 1.9e-09 | 5.7e-06 | 26.5 |
| pfu_aug1.0_3465.1_01461.t1 | 1 | 1 | Amidohydro_1 | 69 | 268 | 1.7e-10 | 41.0 | 8.3e-14 | 2.5e-10 | 40.5 |
| pfu_aug1.0_3465.1_01461.t1 | 2 | 2 | Amidohydro_4 | 190 | 254 | 1.7e-06 | 28.3 | 0.36 | 1100.0 | -0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3465.1_01461.t1 | gi|291238428|ref|XP_002739127.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
Transcript
| Transcript ID | pfu_aug1.0_3465.1_01461.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3465.1_01461.t1 atgtcgcatcgtacaccggtaaagaaagttcccattcatctgcagagtgcccaatccagactgttcatcaaaggaggaaa aatagtcaatgacgatcagagctttgatgcagatatatacatagaagatggcattatcaaacaagttggtaacaatttgg ttatacctggtggggccaggacgattgaagccaaaggcaaacttgttttaccaggaggtattgacacccatactcacatg cagcttccgtttatgggtacacatgccatagatgacttctacagcggtactaaagcagccctggctggaggaactactat gataattgattttgtcctggatcagaagggggtatcattattagaggcgtatgacaagtggagaggatgggctgatggga aggtttgctgtgattacggccttcatgtcggtgtcacatggtggggtccacaagtagccaaggatatggaggttctatgt gcagaaaaaggtattaatagttttaagatgttcttagcctacaaagatgtctttatgttagaagataatgaattatatga aagcttcaaaaaatgtaaacagcttggtgcattggccatggtacatgcagagaatggtcacctgatagcggagaaatcca gggaaatgatacaacttggtataacaggtccagagggacatgagatgtgcaggcctgaagaggttgaggcagaagccact aaccgtgcaatcactatagccaatgaggctaactgtccgctctacgtagtacatgttatgagcaaatctgcagctgatgt tgttacaaatgctcgcagaaaagttatgatcaatttccgaatctgtactatcctctag |
|
Protein
| Protein ID | pfu_aug1.0_3465.1_01461.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3465.1_01461.t1 MSHRTPVKKVPIHLQSAQSRLFIKGGKIVNDDQSFDADIYIEDGIIKQVGNNLVIPGGARTIEAKGKLVLPGGIDTHTHM QLPFMGTHAIDDFYSGTKAALAGGTTMIIDFVLDQKGVSLLEAYDKWRGWADGKVCCDYGLHVGVTWWGPQVAKDMEVLC AEKGINSFKMFLAYKDVFMLEDNELYESFKKCKQLGALAMVHAENGHLIAEKSREMIQLGITGPEGHEMCRPEEVEAEAT NRAITIANEANCPLYVVHVMSKSAADVVTNARRKVMINFRICTIL |
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