Gene
| Gene Model ID | pfu_aug1.0_34698.1_33934 |
|---|---|
| Locus | scaffold34698.1 : 10782 ... 12665 : - |
| To GenomeBrowser | scaffold34698.1:10782..12665 |
| Genes list of scaffold | scaffold34698.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_34698.1_33934.t1 | 3 | 1 | HMG_box | 3 | 46 | 2.4e-07 | 30.8 | 2.8e-10 | 2.1e-06 | 27.9 |
| pfu_aug1.0_34698.1_33934.t1 | 3 | 2 | HMG_box | 57 | 73 | 2.4e-07 | 30.8 | 0.15 | 1100.0 | -0.1 |
| pfu_aug1.0_34698.1_33934.t1 | 3 | 3 | HMG_box | 179 | 195 | 2.4e-07 | 30.8 | 0.39 | 2900.0 | -1.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_34698.1_33934.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34698.1_33934.t1 atgaccaactcctcaaattcagagataagtatacgcctcggacaaatttggtcctccctgcccgtgggggagaagcagcc tttttatttggaagctgagagaatcaagaatagacacagacagtgcttcccagattgggtgtatcagccaaggaagacga agaaaccattcctctacagtcaagtacagcatagccggctatgggagaaacactccgatcagtatgctgtgatgaaatcg tcagtgtctgcaccaagatttaattgtcccacccagagacctgcctacagaccgatcgccccggcagcaccgattcgcca cgtggcagatcagacagtagtggtctcaaatccacaatcggtctgccagacgagcagttcagtccctgtaaggcacagca atgagaatcagcgacactttgcacaactctttggcgatgtagctcctcagcgatcacaactgatgtctgttgtacctagt acacttattggggaaacttttcaaaataatatgtccagtgttgcgagcgcacctttaccaaaagaagagaggctgaaata tgcaaaagtttatcataaagaagagcatggcatttttaccgaacatgtttgtcgaccaaacccgaaatccaagatggcca acacggattctgattggtcggcttattttcgacttctctga |
|
Protein
| Protein ID | pfu_aug1.0_34698.1_33934.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34698.1_33934.t1 MTNSSNSEISIRLGQIWSSLPVGEKQPFYLEAERIKNRHRQCFPDWVYQPRKTKKPFLYSQVQHSRLWEKHSDQYAVMKS SVSAPRFNCPTQRPAYRPIAPAAPIRHVADQTVVVSNPQSVCQTSSSVPVRHSNENQRHFAQLFGDVAPQRSQLMSVVPS TLIGETFQNNMSSVASAPLPKEERLKYAKVYHKEEHGIFTEHVCRPNPKSKMANTDSDWSAYFRLL |
|