Gene
| Gene Model ID | pfu_aug1.0_3472.1_37605 |
|---|---|
| Locus | scaffold3472.1 : 6030 ... 20295 : - |
| To GenomeBrowser | scaffold3472.1:6030..20295 |
| Genes list of scaffold | scaffold3472.1 |
| Synonym | pfu_aug2.0_1311.1_04959 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3472.1_37605.t1 | 3 | 1 | DEAD | 196 | 221 | 9.1e-24 | 83.8 | 6.7e-06 | 0.033 | 13.6 |
| pfu_aug1.0_3472.1_37605.t1 | 3 | 2 | DEAD | 224 | 308 | 9.1e-24 | 83.8 | 1.0e-22 | 5.0e-19 | 68.4 |
| pfu_aug1.0_3472.1_37605.t1 | 1 | 1 | Helicase_C | 382 | 454 | 1.4e-25 | 88.9 | 9.9e-29 | 4.9e-25 | 87.2 |
| pfu_aug1.0_3472.1_37605.t1 | 3 | 3 | DEAD | 382 | 416 | 9.1e-24 | 83.8 | 0.15 | 750.0 | -0.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3472.1_37605.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3472.1_37605.t1 atggctcacctgaggaaactcggacttattggaacaattgaagatggcgaagatatcgagattgaaccagagagttctga tagcgaggaagagggcagacaacagggacagactcaaaagaagaggaagaagaagcctaaaacagatgaattcaatcaca acttttcctttgctgatcagttagatcctagcaaatcgtttgattttgactttgcgttgaaacatgccaagaaaaaacaa gcagcaacaacacttgatgaaaaaattgccaagacaaggaggcttaacaaaaagcaagcaaaagaggttgaagctttggg gagtgatgaggaagaaatagaggaagatatagatgattcttcagatgaagaaatgagatcagatacaataaaaacaaaag agaagaaacagaaaaagaacaaaaagaaaaagaggaagaaagaagattctgatgaggaagaggagaaagagaaaatagaa ttttcagaaagcattgatgcagtagatgagaacatttcctttcaagacatgaatgtctcacgaccactaatgaagggtct gagtcatatgaactttgataaacctacacccatacaatcagcaactattcctgtagcgttactcggcaaagatctgtgtg catgtgcagtcactgggtcaggtggattggacataaaggcacaggaggctgctttaagaatgggacctgatgttgtcata gcaacacctggtcgtctgattgatcacctgcaaaattctcctgtttttaacctcaataatatagaaattctggtgctaga tgaagctgacaggatgttagacgagtattttgctgagcagatgaaggagatcatccgtcaatgttctcgttcacgacaga cgatgttgttctcggccaccatgacggaggctgttcaggacttggcagcagtgtcgctgaaaaacccggttaaaatcttt gtaaatgagaatacagatgttgctctcggtttacgacaggagtttatcagggtcagggccaatagggaaggtgatagaga agccattgtttgtgcattagtaagtcggaccttcagagaccactgtattgtgttcatacaaaccaagaaacaggcacacc gtatgcatattgtacttggcttactaggtattaatgtaggtgagctccacggaaatctatcacaggcacagagattagag acgttaaagagatttaagaatgctgaggttgacgttttactggccacagatctggccgcccgtggtctggatatacaggg ggtcaaaactgtcatcaattttacgatgccaaatacaataaagcattacgtacacagagtgggtagaactgctagagctg gaaagaaaggaagatctgtgactctagttggagaacaggagagaaagctgctaaaagaagttgttaaaaaggctagaact ccattgaaaacaagaatagttcctcaagaggtaataactaaatacaagaacaaaataaacagcttagaaaaagacatcaa agaaattgagaaagaggaggacgaagagagggttacaagagctacggaaaatcaaatgaataaagcaaaaagactgctgg agggaggtaaagagaaggacagtatgaagagaacatggttccaaactcacaaagaaagacaaatggaaaaagacgcctta agattaggtgattataacaaacttccaaggaagaagaggagaatgaatgaagtacagaagcaagtgacagctgaggatag agttaaaaatgaaatccggaagtctcgggagtattctataagagttggaaagaaagcattcaaacctaaaaaattacgag catttagtgagaatgaggatagaaataacaatgttcatggacagaaaggcaagaagcagaagaaaaagaataaaaaaatc tgcttttga |
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Protein
| Protein ID | pfu_aug1.0_3472.1_37605.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3472.1_37605.t1 MAHLRKLGLIGTIEDGEDIEIEPESSDSEEEGRQQGQTQKKRKKKPKTDEFNHNFSFADQLDPSKSFDFDFALKHAKKKQ AATTLDEKIAKTRRLNKKQAKEVEALGSDEEEIEEDIDDSSDEEMRSDTIKTKEKKQKKNKKKKRKKEDSDEEEEKEKIE FSESIDAVDENISFQDMNVSRPLMKGLSHMNFDKPTPIQSATIPVALLGKDLCACAVTGSGGLDIKAQEAALRMGPDVVI ATPGRLIDHLQNSPVFNLNNIEILVLDEADRMLDEYFAEQMKEIIRQCSRSRQTMLFSATMTEAVQDLAAVSLKNPVKIF VNENTDVALGLRQEFIRVRANREGDREAIVCALVSRTFRDHCIVFIQTKKQAHRMHIVLGLLGINVGELHGNLSQAQRLE TLKRFKNAEVDVLLATDLAARGLDIQGVKTVINFTMPNTIKHYVHRVGRTARAGKKGRSVTLVGEQERKLLKEVVKKART PLKTRIVPQEVITKYKNKINSLEKDIKEIEKEEDEERVTRATENQMNKAKRLLEGGKEKDSMKRTWFQTHKERQMEKDAL RLGDYNKLPRKKRRMNEVQKQVTAEDRVKNEIRKSREYSIRVGKKAFKPKKLRAFSENEDRNNNVHGQKGKKQKKKNKKI CF |
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