Gene
| Gene Model ID | pfu_aug1.0_3472.1_37606 |
|---|---|
| Locus | scaffold3472.1 : 28846 ... 30935 : + |
| To GenomeBrowser | scaffold3472.1:28846..30935 |
| Genes list of scaffold | scaffold3472.1 |
| Synonym | pfu_aug2.0_1218.1_28133 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3472.1_37606.t1 | 1 | 1 | Glyco_hydro_20 | 33 | 226 | 8.0e-20 | 71.2 | 8.6e-24 | 1.3e-19 | 70.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3472.1_37606.t1 | gi|156549076|ref|XP_001607502.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3472.1_37606.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3472.1_37606.t1 atggcaaagatcctgaaaaatacggaacataagatcgtgcatttggacttgaaaggggcaccgccaaaagtcggttactt ggaggaaattattcctcaatttcatctatggggtgccacaggtttactgatagagtacgaggacatgtttccatatgagg gagaaataagtgaaatctcagctccagatgcttacagcaaagatgacatagaacgtattctccagatagcagcagaaaat gacatgatagtgataccattggttcagacatttggccacctcgagtttgtactaaagcatgaaaagtttagaacgttgcg agaagtgccatcatatcccatggtactctgtccatcaaatgagaattctttattagctgtcaagatgatgatcgatcaag tgatggcggtacatggcaatccgcagttctttcacatcggagcagatgaagtatatcatatcggagtttgcgagaaatgc aaagcaagaatcaggcttgagaatctgacacctcaagagttgtttttcaaacatgtgaaggaggtagtttcgtacatcaa agaaaagtatccctctttgacaataattatgtgggatgatatgctcagatctgctgatttggcattactaaaggattctg gactaagcgaaatagtagaacctatggtttggcattatgtgaaatcattcatgctacctccagatatttggcagagattt tcaagcgtcttcccgacaatatggtttgctagtgctttcaaaggtgccactggatcttcaatttatgtcacaaatatttc ttaccacatagaaaatcatctagcttggctctcggtgcaggagaatgtgaaatctttattcaagaaaatcaggggatttg ctataactggttggcagagatatgatcattatgccgtgttgtgtgaattactaccccaagcattgccgtcactcggaatc atgcttggaattctcagtaaaggaacattttgcgaagaaattcattcaagcgtttcaaaggacttaaactttttgtcacc cgtaccactaaatccatttcaaagttcagagattccatcatgcaactttcctggcagtgagatctatagagatatgctgt ttttccttcagttagatgcagcatatgaagaatttactcatagtgatcgttattttacgtggatgaatgaatacctgatg agcactaactttgccaatcccgtccatctcgagcctttacttgttcaatcaagaaggctcctagctgaatttcaacatct cagagcacgacttcaaatatcgctacaaaaaatatttttcgagaaaactgtaattgagtggtcatcagtattcatagaac caaaactcaagaagctctctgaattagtcgatgttgctcaatgtcagttacagagggaagcttttgccatggaagaaagt gctcagccatag |
|
Protein
| Protein ID | pfu_aug1.0_3472.1_37606.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3472.1_37606.t1 MAKILKNTEHKIVHLDLKGAPPKVGYLEEIIPQFHLWGATGLLIEYEDMFPYEGEISEISAPDAYSKDDIERILQIAAEN DMIVIPLVQTFGHLEFVLKHEKFRTLREVPSYPMVLCPSNENSLLAVKMMIDQVMAVHGNPQFFHIGADEVYHIGVCEKC KARIRLENLTPQELFFKHVKEVVSYIKEKYPSLTIIMWDDMLRSADLALLKDSGLSEIVEPMVWHYVKSFMLPPDIWQRF SSVFPTIWFASAFKGATGSSIYVTNISYHIENHLAWLSVQENVKSLFKKIRGFAITGWQRYDHYAVLCELLPQALPSLGI MLGILSKGTFCEEIHSSVSKDLNFLSPVPLNPFQSSEIPSCNFPGSEIYRDMLFFLQLDAAYEEFTHSDRYFTWMNEYLM STNFANPVHLEPLLVQSRRLLAEFQHLRARLQISLQKIFFEKTVIEWSSVFIEPKLKKLSELVDVAQCQLQREAFAMEES AQP |
|