Gene
| Gene Model ID | pfu_aug1.0_3472.1_37607 |
|---|---|
| Locus | scaffold3472.1 : 31406 ... 40545 : + |
| To GenomeBrowser | scaffold3472.1:31406..40545 |
| Genes list of scaffold | scaffold3472.1 |
| Synonym | pfu_aug2.0_1218.1_28132 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3472.1_37607.t1 | 1 | 1 | XPG_I | 1 | 54 | 2.1e-10 | 40.4 | 1.2e-13 | 5.7e-10 | 39.1 |
| pfu_aug1.0_3472.1_37607.t1 | 1 | 1 | 5_3_exonuc | 41 | 100 | 5.6e-08 | 32.9 | 1.9e-11 | 9.6e-08 | 32.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3472.1_37607.t1 | gi|15778123|dbj|BAB68507.1| | FEN-1 nuclease [Gallus gallus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3472.1_37607.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3472.1_37607.t1 atggatgccctcacctttggtacaaatgtacttctacgacatctcactgttagtgaggcaaggaaactacccataaaaga attcagctacaacagagtactggatgagttaggtgtagataaagaccagtttatagatttgtgcattttacttgggtgcg attattgtgattcgattcgaggcataggaccgaaacgagcgtatgatttgatcaaacagcataagaacattgaggaaatt ctcaaacacttagactcaaagatgtctaataattattaccatgatatcattgaaggagaaactccctatgatagcattaa agtctttactacatgtaaatgtctctatatgatttacagtgaagaaaggatacgtaatggagtaaagaaattacttaaag ccaagcagggaactacacaaggacgtctggattctttcttctcagtggtatcgacacattcatcgacaaaaagaaagcaa gacgagcagaaagggtctgcaaagaagaaggcaaaggggggtggattcaaacgaccaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_3472.1_37607.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3472.1_37607.t1 MDALTFGTNVLLRHLTVSEARKLPIKEFSYNRVLDELGVDKDQFIDLCILLGCDYCDSIRGIGPKRAYDLIKQHKNIEEI LKHLDSKMSNNYYHDIIEGETPYDSIKVFTTCKCLYMIYSEERIRNGVKKLLKAKQGTTQGRLDSFFSVVSTHSSTKRKQ DEQKGSAKKKAKGGGFKRPK |
|