Gene
| Gene Model ID | pfu_aug1.0_3478.1_37614 |
|---|---|
| Locus | scaffold3478.1 : 55356 ... 77445 : + |
| To GenomeBrowser | scaffold3478.1:55356..77445 |
| Genes list of scaffold | scaffold3478.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3478.1_37614.t1 | 5 | 1 | I-set | 26 | 115 | 0.0 | 204.0 | 8.7e-22 | 2.6e-18 | 65.6 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 1 | Ig_2 | 32 | 115 | 9.5e-23 | 80.1 | 4.6e-11 | 1.4e-07 | 31.5 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 1 | Ig_3 | 33 | 101 | 9.2e-14 | 51.7 | 2.2e-05 | 0.066 | 13.7 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 1 | ig | 40 | 99 | 1.9e-15 | 56.7 | 2.6e-10 | 7.6e-07 | 29.1 |
| pfu_aug1.0_3478.1_37614.t1 | 5 | 2 | I-set | 132 | 222 | 0.0 | 204.0 | 4.1e-15 | 1.2e-11 | 44.2 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 2 | Ig_2 | 148 | 217 | 9.5e-23 | 80.1 | 2.4e-07 | 0.00072 | 19.6 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 2 | ig | 150 | 207 | 1.9e-15 | 56.7 | 1.5e-06 | 0.0044 | 17.1 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 2 | Ig_3 | 188 | 209 | 9.2e-14 | 51.7 | 0.0021 | 6.3 | 7.3 |
| pfu_aug1.0_3478.1_37614.t1 | 5 | 3 | I-set | 232 | 258 | 0.0 | 204.0 | 0.019 | 58.0 | 3.6 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 3 | Ig_3 | 264 | 342 | 9.2e-14 | 51.7 | 5.3e-07 | 0.0016 | 18.9 |
| pfu_aug1.0_3478.1_37614.t1 | 5 | 4 | I-set | 265 | 355 | 0.0 | 204.0 | 5.9e-17 | 1.7e-13 | 50.1 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 3 | Ig_2 | 276 | 355 | 9.5e-23 | 80.1 | 5.0e-05 | 0.15 | 12.2 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 3 | ig | 322 | 340 | 1.9e-15 | 56.7 | 0.035 | 110.0 | 3.0 |
| pfu_aug1.0_3478.1_37614.t1 | 5 | 5 | I-set | 994 | 1036 | 0.0 | 204.0 | 1.0e-11 | 3.0e-08 | 33.3 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 4 | Ig_2 | 1000 | 1035 | 9.5e-23 | 80.1 | 0.00019 | 0.57 | 10.3 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 4 | Ig_3 | 1006 | 1034 | 9.2e-14 | 51.7 | 0.013 | 39.0 | 4.8 |
| pfu_aug1.0_3478.1_37614.t1 | 4 | 4 | ig | 1008 | 1033 | 1.9e-15 | 56.7 | 0.023 | 67.0 | 3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3478.1_37614.t1 | gi|307172721|gb|EFN64027.1| | Myosin light chain kinase, smooth muscle [Camponotus floridanus] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_3478.1_37614.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3478.1_37614.t1 atgtacttagaaagaatagaattcccgagactgatcagagataggcggtcctctaaaagtgacaaagagactcccccaga ctttataaccaaaccccgtagacagtttgtggaggagggccagacagccaagttcaaggcctcatacgatggacccccat ctactaaacttacatggagtaaaaacggaaagcccatcactaatgacaaacaacataggatctactgtgagaacgacgtc cattacctagacatatgtgccgttacgtcagatgacggcggtcagtacacgtgtaccctacaaagcccctcgggtactgc cacggcgtcggctgaactagaggtttttgtgagaccgaagtccgcctctaggaaggaccaaggatttgtatctccccagg ttgacgtccctttgaccgatatgtacgtctccaacggcgaacgtaacgtcaaaatggaatgcaaattttcaaacgccatt gacgctacatgtgtctggaaaagaaatggacagaaattgaattctagttacctcagtaaacaaacgtttgacggaaggtt agccacgctgacgctaagtcgcatcaccgacagagaaaccggaagttacgaatgtgaagctagcagttccggtgggtctg ctgtcaccaaggcaacgctgtcaatttcagatccaacaaccaggcatataccaccaacgttcgtcacacccctatctgac cacgccctagctcctggggagtcagtggttctggaatctagggttacaggcgccagttctcagggggagccaccaatatt tgtcaaagaacttaccgacatggacgctgacgagggcgataaagtcgagcttgtggttgaggtcaaaggcacgtttccta tatatgttgcatggttacatagagaaagggaacttcctattaatgatcatgacttcagaattttctctgacaaaaatgtg cacaaattgataattcctgaagtgtttcttgaagattctggaaagtttatttgtgaagtgtataatgaccatggagatac tgagacattttgtaatctgaatgttagagtatcaaataaatttgtatcttatcatgatacaaaatgtgaatcaaaaaaat atactgtgtatatgtatattgatattgtatttttcagttcattaccaaatactccttcaaccagtattaaatcatctagt cctattaaaagcactgatgagaaaaaagaaccaacatttgttccgacaaaaacatcaaaattacagcacactgaagaaac aacctcaagactttcggagaataaaaactccttttcttcattgaaacaaacagaaaggaaaatcagtgcaccaagtcata gtggatcagtgtcaaaacaaattgataggtggcaaaaactggaacagaaaccaccaaagtcaccagtaagtgtagactat agaagtgttctgaaatcgcgacaaaaaattagtgacacaagtcgacagcttcctgacgaaggatccacagatggtggaaa aaatattcgtaattttagtaaaacttgttcaacaagaaattcatctacacaaagtactgtacgtagtccacattcaaact tttctagtcaacctagattatcggagggaaatatatttcaatttcgaatacaaagaaacgctacgcaaaattcaccaact tcaaatacgcagcattataacacaggaagcaaggtctcttcactgaaacaggcattttcagaggaaaatctgtgtaaaag tccaactagttacaattatgacaaaactccaagtgaattacgaagaacttcattacctaaacaagatgtcaataaaaatg tgaacaagtggaatgtgtcatctaattcaccgaaaatggagaggaggggtgttcaaaatgaagtgacatcaacaaggagg acttttgagggatacgataaaaatagagatcaatcagtatcaaaacagaatgtggacaaatcaatgtcaaatgaagctaa ttctagggatattttaaaaatgaaggctgtttcaaattttgaggaaaattttcagaaaaatgaatttgtagattcacaaa atgtaaggcctaaaagggattttttaaaaagggaatcaccaggactgaaaaaggaaccaagcgaggaggaaattcgtgca atattagataaaaggagggaaaaatcaccatatagattcagaaaccaaaataacaatggaaatcatcatcaaaaagtaga cgaagagaaatcacaaaatactgtgtcacttgagaaaaaaatcaacagctcttcattaccgcagaactttttgaacaccc cttctaataaaccaatggcatcatctttaaaccaaaaatcaaatattgagacaaccaatcaaattagagatacaaagttt ttgaaaatgtcacccaatcaaagtggagataccaatggttctagctatgacgatcagaactttgtacaaactatgctgga aaaaagacgacaaagaagaaatatgaaaagttcttttcagtcagaccaaggttaccatagcaacagcgatcaacaaagta gcaattcaacagaaattctcagtgacagagacaaccatcaatatgatcacacaaagagaatagatccaagtgaaaatcaa agcccaaaatcatttttgaggaataaagaaaacgttgaagaaaactccgtactgtgtgagagcagagcagcagaaaatgt ccaatctcgaattttggaagatcaaaacagcctcgataaagatgctgtaattgcaataaaagccataaccgaatttgaga aaagaaactctttaagtgattctgaccgttcaagtcgtgtacccgatgattttaggagtgttttatcaaaaagaagagaa agtgacaactccagcaggaaagattctgctaaaacattagtccaaaatgattttcgccacgtcctaaaacgacacggtga tacaagaagtagaaaacatcctacattccagtcacggatgactgatcagaaggtcaaggaaggtcaatccgttaccatgg agatcaaagtgaccggtactcccaggcctgatatcacgtggtacatgaatggcaaaactataaagatagtgatagcattg ggactactcgcagaaagtaatgtaaacctcagagaaagtcaaggttacggcaaatgtcaagaattaatcaacgatcaacc tgcagatgattctgtccgaagcacgtccgaaaagtcatacgtccctgacctcacagaaaattcggtatccaagacaagca tcgtcaccaaggaaactactcacagtgacgagaacgaggccagttacacaagtgatgaagatgagccacaggaaacacca aaagttgtggcccctt |
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Protein
| Protein ID | pfu_aug1.0_3478.1_37614.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3478.1_37614.t1 MYLERIEFPRLIRDRRSSKSDKETPPDFITKPRRQFVEEGQTAKFKASYDGPPSTKLTWSKNGKPITNDKQHRIYCENDV HYLDICAVTSDDGGQYTCTLQSPSGTATASAELEVFVRPKSASRKDQGFVSPQVDVPLTDMYVSNGERNVKMECKFSNAI DATCVWKRNGQKLNSSYLSKQTFDGRLATLTLSRITDRETGSYECEASSSGGSAVTKATLSISDPTTRHIPPTFVTPLSD HALAPGESVVLESRVTGASSQGEPPIFVKELTDMDADEGDKVELVVEVKGTFPIYVAWLHRERELPINDHDFRIFSDKNV HKLIIPEVFLEDSGKFICEVYNDHGDTETFCNLNVRVSNKFVSYHDTKCESKKYTVYMYIDIVFFSSLPNTPSTSIKSSS PIKSTDEKKEPTFVPTKTSKLQHTEETTSRLSENKNSFSSLKQTERKISAPSHSGSVSKQIDRWQKLEQKPPKSPVSVDY RSVLKSRQKISDTSRQLPDEGSTDGGKNIRNFSKTCSTRNSSTQSTVRSPHSNFSSQPRLSEGNIFQFRIQRNATQNSPT SNTQHYNTGSKVSSLKQAFSEENLCKSPTSYNYDKTPSELRRTSLPKQDVNKNVNKWNVSSNSPKMERRGVQNEVTSTRR TFEGYDKNRDQSVSKQNVDKSMSNEANSRDILKMKAVSNFEENFQKNEFVDSQNVRPKRDFLKRESPGLKKEPSEEEIRA ILDKRREKSPYRFRNQNNNGNHHQKVDEEKSQNTVSLEKKINSSSLPQNFLNTPSNKPMASSLNQKSNIETTNQIRDTKF LKMSPNQSGDTNGSSYDDQNFVQTMLEKRRQRRNMKSSFQSDQGYHSNSDQQSSNSTEILSDRDNHQYDHTKRIDPSENQ SPKSFLRNKENVEENSVLCESRAAENVQSRILEDQNSLDKDAVIAIKAITEFEKRNSLSDSDRSSRVPDDFRSVLSKRRE SDNSSRKDSAKTLVQNDFRHVLKRHGDTRSRKHPTFQSRMTDQKVKEGQSVTMEIKVTGTPRPDITWYMNGKTIKIVIAL GLLAESNVNLRESQGYGKCQELINDQPADDSVRSTSEKSYVPDLTENSVSKTSIVTKETTHSDENEASYTSDEDEPQETP KVVAP |
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