Gene
| Gene Model ID | pfu_aug1.0_3481.1_16117 |
|---|---|
| Locus | scaffold3481.1 : 43229 ... 70495 : - |
| To GenomeBrowser | scaffold3481.1:43229..70495 |
| Genes list of scaffold | scaffold3481.1 |
| Synonym | pfu_aug2.0_646.1_21018 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3481.1_16117.t1 | 1 | 1 | CARD | 34 | 113 | 2.7e-10 | 39.9 | 3.3e-13 | 8.3e-10 | 38.3 |
| pfu_aug1.0_3481.1_16117.t1 | 3 | 1 | PDZ | 318 | 391 | 7.4e-39 | 131.7 | 2.1e-14 | 5.3e-11 | 42.5 |
| pfu_aug1.0_3481.1_16117.t1 | 4 | 1 | PDZ_2 | 338 | 383 | 2.0e-11 | 43.6 | 3.0e-05 | 0.075 | 12.9 |
| pfu_aug1.0_3481.1_16117.t1 | 4 | 2 | PDZ_2 | 693 | 731 | 2.0e-11 | 43.6 | 0.96 | 2400.0 | -1.5 |
| pfu_aug1.0_3481.1_16117.t1 | 3 | 2 | PDZ | 738 | 813 | 7.4e-39 | 131.7 | 3.7e-16 | 9.2e-13 | 48.1 |
| pfu_aug1.0_3481.1_16117.t1 | 4 | 3 | PDZ_2 | 756 | 812 | 2.0e-11 | 43.6 | 7.1e-07 | 0.0017 | 18.1 |
| pfu_aug1.0_3481.1_16117.t1 | 3 | 3 | PDZ | 873 | 947 | 7.4e-39 | 131.7 | 3.4e-13 | 8.4e-10 | 38.7 |
| pfu_aug1.0_3481.1_16117.t1 | 4 | 4 | PDZ_2 | 889 | 946 | 2.0e-11 | 43.6 | 0.0019 | 4.8 | 7.1 |
| pfu_aug1.0_3481.1_16117.t1 | 1 | 1 | Guanylate_kin | 1158 | 1256 | 8.6e-09 | 35.0 | 9.4e-12 | 2.3e-08 | 33.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3481.1_16117.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3481.1_16117.t1 atggaaatctccccattagattacatgtatctaaacccacataccatccgcacgaagccagtacaatgtgttctcctgtt cggaatggaagaaaaacacaaagagcttctggaccatctcaagacaaactttacaaattcatttgatgttgaaaagctcg tccccgttcttcgaagagaaaatattttcaccgaggtcgacgtatcggaggttgagaatacacttagtagagacaaagct gaaaagctgatcgatatcataaagttaaaggataaggatgccttcgagaaattatgcaaagcgttagaaaacaccttccc acatttactgacggtgatgtttcttggaagtcagaggaggcgttcaggtgtaccaactggtagctcagattggaattgtt atggaccttttcatgatgatattaatgcatatgaatgtcagtatgtgtatgcgtcgacctatcgtgtatatactgtaggc tatgcatgcaccgattccaatttcccttctctaacgtcggattctgatgaaaacatactttataatcggtccagtacttc agacgaacagattttatattctacaacagaggcccgtcaagaggcagaaaagtcaaagaaaaacttagactgggctttag gtgagagagacaagatcgttcaggagcgcgagggcatacgttccctatgtgaaagtctacgtcatcaacgcgacagggcc gtcagcgacaaggctcaagcactacgagactacgacaaactcaacagagagaagattgatgcatgtagagaactcaaaga tctcagagaaaagtatgaaagcattgtggaaaaagaagcacgtaaaaatcagctgaatggtgtcggtcataaccatagta gagactcagccatcgatgccgatctacaggaatttgaaacggaaactgtcgaagtagaaatgcgtggacttgatccagac aatctaggctttgaacttgttggaggtaaagatgaccctcaattaccaagtgataactccatcttcattggccatgtctc caagggcagtcaagcggaacaaaagttaaaagttaatgacatattagtacagttaaatggaatggatgttaccaatattg acaaaagatctgtcattcattcactcagaaacactccacgtgtcttgatgcttgtacggagaagaagatgtattactccc agaagctggcagcccttacagcttaatctcatgtttggtaaagtcacttcccccaagacaagcagcaaatcccagccata tatacccagccctaacctgaacagcccttcttctcaaccgtttacgttcaatcccgacactgcacttcacacggtcgagg gaaaccaccgtggtcaaagaccatctcgaaacagcggcttcaacgtcagacgaaatcctccttctagtcatcatcaccat tatgacgtgccttttaccatgtccggtaacggaaaacatcgtcagaggtccgtaccggacaaagacaaatatagtcatct aatatctccaaagtctagtcagatatactcttctactgagtcatccagcagcagcaaggatccatttgcatttccacaaa ggaacatatctccgagtaccagactgtcaagtgatttcccgccattcgatcccaattcgttggctagaagcagccagagt cagagaaattacagtggaaggtctgttccaccgccatatcgacctcattcgtcatattccagtgtcagtcattctggctc ctatggtagtggcaacccactcccttcagtcccctctggccatcacatgtccagcccacattccctctcccccacctata attccccaccctattcattccccatacctgactatgagacgaccacgccctcttacaatgaggcgtggtgtagctctccg tgtccttcccagatgagttccacgcccagtgatcacatgtataactacatacccagtggaaactcgtcgtatagcagccg tattgataacgaaccaagcagtacattcccgaggaaaggagagagaatcttcataccacccagtgtgtcatcttcaacca agtcaggatctgtagaagttgtgtctgcaagaagtagtcctgcatctcccatgttgaaggaagactctgtcactagtctg gaatctataccatcacacagaagaaaaccaataaatggagagacaaggaagataaacattgagaggacggcacaacccgt aggatttcagatcggtagcggtgtgaacgggggcgtgtttgtgtccagagtcaataagaacagcctggcagcagaggcag ggcttgtcataggggatcaattattagagatatgtggtatcaatatgagaacagcaacagaacaaatggccaagacattt ctacgacagacagggaacactctaagcttactggtccaatataatccacatgaatataagcagtctgcggaatcgtctgg cgatagtagcggtacttcacccgtcaactccccagactcggcatcatatcgtaaagacagaaaaatatcagctcaggaac gcttgtctgtcagtactgacattccatgtgaagctccaagatggattaccttcaagaaacattcaccatctacgagtata ggcttagtgatagccggaggtaacgctgttggtatctttatacacgaggtccatcctactagctttgcttttggaccgaa tggtttacattgtggagatcagatactggagtacaacagagtggacttcagatcaatcacagctgaggaagcctatattg agttgggcaagccttgctcctctgtgcagatgaatgtccagtataacccaccaaagtaccacaaggtgatcaaaatgcct ggaggtggcgactgtttctatgttagagcacactttgatcacaagtccacgaccgagggggatctaagcttcagacgtga tgatatactacttgtggctaataccctgatggacggcaaacctggaagctggctagcgtggctggtggacgatgacggca aaaaactcaacaagggcacgattccaagtaaagaaaagttagaggatgattatgaattaaagcgaagctattctgaaagc ctcagtttacacgaccctgaggaaccacgagggtcaaccagacgagggtcaggatcggctagaagtagtttcttcagacg gaaaggcaaacacaaacgaaacaattccaaagacagtcgggagttcaactctttctccgatgcatctctgaacagtgatt ctgtgcccattcttgatgatcttgcagtattcaaatacaccaaagtagaaagaatggaatataagctaacaagacctgtg attttattggcacccttagctgaaccattaatcaacaaactatcagcagaatccccggacaagtatgagtttggacaacc aaaaaaccttgtacattctcatgatccttcacaaatctcatttcagagaatacactgtttgctgaacatcagtccagctg ccattgaacggctacatagactgcagatataccccattgttatatttgtacggcatagatctcataaacagcttagggag atcacagaccccaagtttttaccacagaagcttagtgccaaagctgccaaggatctctttgacagattccataaattgga aaaagattaccagcatcagttctctgctgtgattcagggtggaaaccttgcagaaatgcatcaacaaataaagaccgtta tagactctgaacagaagaaggccatctgggtgcctgtatgttccgtttggtga |
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Protein
| Protein ID | pfu_aug1.0_3481.1_16117.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3481.1_16117.t1 MEISPLDYMYLNPHTIRTKPVQCVLLFGMEEKHKELLDHLKTNFTNSFDVEKLVPVLRRENIFTEVDVSEVENTLSRDKA EKLIDIIKLKDKDAFEKLCKALENTFPHLLTVMFLGSQRRRSGVPTGSSDWNCYGPFHDDINAYECQYVYASTYRVYTVG YACTDSNFPSLTSDSDENILYNRSSTSDEQILYSTTEARQEAEKSKKNLDWALGERDKIVQEREGIRSLCESLRHQRDRA VSDKAQALRDYDKLNREKIDACRELKDLREKYESIVEKEARKNQLNGVGHNHSRDSAIDADLQEFETETVEVEMRGLDPD NLGFELVGGKDDPQLPSDNSIFIGHVSKGSQAEQKLKVNDILVQLNGMDVTNIDKRSVIHSLRNTPRVLMLVRRRRCITP RSWQPLQLNLMFGKVTSPKTSSKSQPYIPSPNLNSPSSQPFTFNPDTALHTVEGNHRGQRPSRNSGFNVRRNPPSSHHHH YDVPFTMSGNGKHRQRSVPDKDKYSHLISPKSSQIYSSTESSSSSKDPFAFPQRNISPSTRLSSDFPPFDPNSLARSSQS QRNYSGRSVPPPYRPHSSYSSVSHSGSYGSGNPLPSVPSGHHMSSPHSLSPTYNSPPYSFPIPDYETTTPSYNEAWCSSP CPSQMSSTPSDHMYNYIPSGNSSYSSRIDNEPSSTFPRKGERIFIPPSVSSSTKSGSVEVVSARSSPASPMLKEDSVTSL ESIPSHRRKPINGETRKINIERTAQPVGFQIGSGVNGGVFVSRVNKNSLAAEAGLVIGDQLLEICGINMRTATEQMAKTF LRQTGNTLSLLVQYNPHEYKQSAESSGDSSGTSPVNSPDSASYRKDRKISAQERLSVSTDIPCEAPRWITFKKHSPSTSI GLVIAGGNAVGIFIHEVHPTSFAFGPNGLHCGDQILEYNRVDFRSITAEEAYIELGKPCSSVQMNVQYNPPKYHKVIKMP GGGDCFYVRAHFDHKSTTEGDLSFRRDDILLVANTLMDGKPGSWLAWLVDDDGKKLNKGTIPSKEKLEDDYELKRSYSES LSLHDPEEPRGSTRRGSGSARSSFFRRKGKHKRNNSKDSREFNSFSDASLNSDSVPILDDLAVFKYTKVERMEYKLTRPV ILLAPLAEPLINKLSAESPDKYEFGQPKNLVHSHDPSQISFQRIHCLLNISPAAIERLHRLQIYPIVIFVRHRSHKQLRE ITDPKFLPQKLSAKAAKDLFDRFHKLEKDYQHQFSAVIQGGNLAEMHQQIKTVIDSEQKKAIWVPVCSVW |
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