Gene
| Gene Model ID | pfu_aug1.0_34873.1_12188 |
|---|---|
| Locus | scaffold34873.1 : 2733 ... 6661 : + |
| To GenomeBrowser | scaffold34873.1:2733..6661 |
| Genes list of scaffold | scaffold34873.1 |
| Synonym | pfu_aug2.0_80.1_00189 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_34873.1_12188.t1 | 1 | 1 | Trefoil | 159 | 215 | 4.3e-13 | 48.6 | 6.4e-17 | 9.5e-13 | 47.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_34873.1_12188.t1 | gi|291230922|ref|XP_002735414.1| | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_34873.1_12188.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34873.1_12188.t1 atggctgatacaggacggtggacagtcgtgttactggtttcgttcgggcttttaacgttggtttgttggaggccatggtc gtacaatgttttcttacagtttagtgtcaatgaaccttcaagaatcaatgagagccaagtgagaatattaatgtacaaac tcattgcttccgggggcgaaaattctaaggacaaaatagacgatgccgtcaatgtcatagaactccatatgcaagatgag agcgtcaaagacggacatgaaaaactcaaagtcacaggcaagcacgaaaattcaaaaatcacgttcgaaaacgattttga aatcattgacggacaacctaaaaagatacactatcactataaagcagaaaacgtagacaaaaacgataaatcaaaagtga aagacaaatccaaaagtattaacgtcgtagacaaacatgaaaataccaaaagggtgagttttcagtgcaatgatccgata gaagataatgccagatttgattgctatcccgaagacattgccaccaaagaaaaatgcgttgctaggggatgctgttggaa accggcattaaaaagaaggttggacagggacgatgaaccaagcgtctcggaaaatccggagggcgttccatggtgctatt atcccagtgattttccggggtatacggtacagaacactagtaatctaccatatggaatccggaccgaaatcacacggagt acatcatcatattaccccagagacataatggacctcaccgtagaattcacatatgaaactgatacaagacttcgtctaag g |
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Protein
| Protein ID | pfu_aug1.0_34873.1_12188.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_34873.1_12188.t1 MADTGRWTVVLLVSFGLLTLVCWRPWSYNVFLQFSVNEPSRINESQVRILMYKLIASGGENSKDKIDDAVNVIELHMQDE SVKDGHEKLKVTGKHENSKITFENDFEIIDGQPKKIHYHYKAENVDKNDKSKVKDKSKSINVVDKHENTKRVSFQCNDPI EDNARFDCYPEDIATKEKCVARGCCWKPALKRRLDRDDEPSVSENPEGVPWCYYPSDFPGYTVQNTSNLPYGIRTEITRS TSSYYPRDIMDLTVEFTYETDTRLRLR |
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