Gene
Gene Model ID | pfu_aug1.0_3498.1_37620 |
---|---|
Locus | scaffold3498.1 : 46454 ... 55895 : - |
To GenomeBrowser | scaffold3498.1:46454..55895 |
Genes list of scaffold | scaffold3498.1 |
Synonym | pfu_aug2.0_266.1_20509 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3498.1_37620.t1 | gi|291236408|ref|XP_002738131.1| | PREDICTED: coiled-coil domain-containing protein 170-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_3498.1_37620.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3498.1_37620.t1 atggatgctatccccaaagtgaccattcgttcaggggcagactcatatagagaaatcaaaataagggaaatcaagaccct gtatgagacaagtaaagagaatgaatctcgactgagtgctttactggagtctcaccgacagcagatactggatctggagg gtaaagctgggtcatatgaacatgtagtgggacgcagtgaatacaccgtcaaagctctacagatgcagagtggggaatac catgaaaaggtgctagaacttgaatctcgcgtcagaaagcatttggaagagagagaaaaggcagagactcagtacgcgat gttagagaaacgataccaggaaatgacatctcagcttactagtatactccgtgttgatgaatttagcgacttttcatact cagcagaagagattgttagaaagatgactgatttggtgcaagagaatgctttactgaagggaaaaatagtgactctgcat gaaactctgaacaacacagagctggaaagcaaggccagccgtgaaaccataatgagacttgtttcagaggttggcaagga acagaaagttgctacaagatttacctcagaagtagaaaatctcagactggaacgggatcaggccatcacagagtgtagga atattgacagagaaaacgttttactgagagaacgaatggaagcttgtcaaaaggcattagacgcagcacgagaggagctc caacttaaggaacataggctttcatctatagatcgtgaataccgcgctacatcagaggacatcagaaaataccatacaga ggctagcttgttccgtgagcagatagctaatcttctgtccagtgagatcagtgaggaggcaatcaaacgacgagtcaacc ttctacaacaggataatagagatctggtcactaaagttgagtcaatggaggagagagtgaagacgctgacagagcagttg gagactcagtatgagctccataagacggcctcacatcgagctcgtaaggctgaatcagagttagctgagctcgaggagag actacgcagtgcagagggagagctggcagcaggtgacgtactcagggatggcttcaaacttgacaaagaaaagtacttaa gggccttgcagagattaggagagaaaatgaagatggaccgtatttctatcgaccttggtctggacctgacaatcgatgcc ctcatcacgcgtgctgagcagctagtcaaactggaacaggacgctattgctgataaatctacacacatatacaacctgca acgcaaagtaaaatcactcaaagagcaattagaaagtaaagacttacacttagatctactgagaaagaaaatgaccaact tagaagagaaattaaaacgtcagtccagtaagatacgtcatctcaaggaagaagtggacgctacaaacgttgatactgca gaaaagagggtcgtgtctgaaaatgctgtacaagccttgtctagtgagctcagaacaacgaagaatgctctgaatgctat acaaaccagggaaaagcagctccttgatttccgtaacgtagttgccaggatgttgggcctggatatgaacacgctagcag taccagactatgagatcatctctcggcttgagaagctgatccaggcacaccacacacacgcattcaccaccatgagtatg gaggaagctttggcagatatgcaggatggcttccttagtggctacgaggagtatcggcaaagtgtgggatcagaaaacag cagcatacgacgtgcgcgtgaacgcgtcaagaggaaggcagccagagcaagagcaaggtcactctccccacagcgtagag atcctagggtctattag |
Protein
Protein ID | pfu_aug1.0_3498.1_37620.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3498.1_37620.t1 MDAIPKVTIRSGADSYREIKIREIKTLYETSKENESRLSALLESHRQQILDLEGKAGSYEHVVGRSEYTVKALQMQSGEY HEKVLELESRVRKHLEEREKAETQYAMLEKRYQEMTSQLTSILRVDEFSDFSYSAEEIVRKMTDLVQENALLKGKIVTLH ETLNNTELESKASRETIMRLVSEVGKEQKVATRFTSEVENLRLERDQAITECRNIDRENVLLRERMEACQKALDAAREEL QLKEHRLSSIDREYRATSEDIRKYHTEASLFREQIANLLSSEISEEAIKRRVNLLQQDNRDLVTKVESMEERVKTLTEQL ETQYELHKTASHRARKAESELAELEERLRSAEGELAAGDVLRDGFKLDKEKYLRALQRLGEKMKMDRISIDLGLDLTIDA LITRAEQLVKLEQDAIADKSTHIYNLQRKVKSLKEQLESKDLHLDLLRKKMTNLEEKLKRQSSKIRHLKEEVDATNVDTA EKRVVSENAVQALSSELRTTKNALNAIQTREKQLLDFRNVVARMLGLDMNTLAVPDYEIISRLEKLIQAHHTHAFTTMSM EEALADMQDGFLSGYEEYRQSVGSENSSIRRARERVKRKAARARARSLSPQRRDPRVY |