Gene
| Gene Model ID | pfu_aug1.0_3500.1_30428 |
|---|---|
| Locus | scaffold3500.1 : 42206 ... 50713 : + |
| To GenomeBrowser | scaffold3500.1:42206..50713 |
| Genes list of scaffold | scaffold3500.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3500.1_30428.t1 | 1 | 1 | Lectin_C | 28 | 141 | 2.0e-13 | 50.9 | 1.3e-16 | 3.9e-13 | 49.9 |
| pfu_aug1.0_3500.1_30428.t1 | 1 | 1 | CUB | 148 | 262 | 2.7e-13 | 49.9 | 1.7e-16 | 5.2e-13 | 49.0 |
| pfu_aug1.0_3500.1_30428.t1 | 1 | 1 | CUB_2 | 151 | 211 | 6.1e-06 | 25.7 | 4.5e-09 | 1.3e-05 | 24.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3500.1_30428.t1 | gi|195116387|ref|XP_002002737.1| | GI11276 [Drosophila mojavensis] | 6.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_3500.1_30428.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3500.1_30428.t1 atgcatgtccctcagtttgtcacaggatgggagaacataggaacatcatgttatcgagtgttcggtaccagttcctcaca ggccctgacttggcagaatgcctacagaacatgccaaggatatgggtccatgctggttgaggtacatgattatctctcta atgaagagattggcatgttcggttaccaaagatcggcatcaaagttctggataggtatgagtagaattaatgctaataac gatgctttctctacaacatggaatatgcgcactccggccacgatatacgagggatactatcataacaacatgcccgacct aactaaaggagactgcatgtacgtggagaggtccaacgattaccctacgtacaagtgggtggtgggtaaatgtaaagaaa agatggcctttatctgtcagcggccttcatgtcctactggatgtgacgttacttacacccaagaatacggtgaaatattc agccctggatatggcgttgttaattatgccaataaccaggagtgtacctggactataaatatagccagtggtaaagcctt ctcactacagtttgatgcaggctttcagctacaggataattatgacttccttcaggtatttaaagcggccacaaattcct ctggtgtaccagcacatcctgtcactaatggttttactactgtatctttggcatcatcaaatccaatcaagagtgataac ggcaaaatgttcctacgttttaaaactggtgctgtaacaaatgccaagggtttccgagcactttactcagtggcgatgat ttacggatctgcgactgctgatattgagttatgcatttggtattcagattcactaagacgaactttcacagtctga |
|
Protein
| Protein ID | pfu_aug1.0_3500.1_30428.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3500.1_30428.t1 MHVPQFVTGWENIGTSCYRVFGTSSSQALTWQNAYRTCQGYGSMLVEVHDYLSNEEIGMFGYQRSASKFWIGMSRINANN DAFSTTWNMRTPATIYEGYYHNNMPDLTKGDCMYVERSNDYPTYKWVVGKCKEKMAFICQRPSCPTGCDVTYTQEYGEIF SPGYGVVNYANNQECTWTINIASGKAFSLQFDAGFQLQDNYDFLQVFKAATNSSGVPAHPVTNGFTTVSLASSNPIKSDN GKMFLRFKTGAVTNAKGFRALYSVAMIYGSATADIELCIWYSDSLRRTFTV |
|