Gene
| Gene Model ID | pfu_aug1.0_3506.1_66716 |
|---|---|
| Locus | scaffold3506.1 : 24236 ... 41509 : - |
| To GenomeBrowser | scaffold3506.1:24236..41509 |
| Genes list of scaffold | scaffold3506.1 |
| Synonym | pfu_aug2.0_33.1_10141 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3506.1_66716.t1 | 1 | 1 | LKAAEAR | 15 | 152 | 0.0 | 171.1 | 0.0 | 0.0 | 170.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3506.1_66716.t1 | gi|291239751|ref|XP_002739785.1| | PREDICTED: uncharacterized protein C20orf201-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_3506.1_66716.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3506.1_66716.t1 agtctacccccaatagatgatgatggtgcaggagggaaatttaagcctcgtaacaggaagaaaattgaagctcaagattt aaaaaagctggctcctcaacaaagaagtcgttatcttgcttatgaagaccctccaaaagaagtgaatgaagccatgggtg ccacaaagaaaagacttgctgaggaaaagaaaagacttgagagggcaaatgctcccccttcagaagaagaagttgatgag agagaaaaacatgcaaaactcattgggcagttaaaggcagcagaagccagaaatagactgcgtattatgagattacggta ccaagctaatagggcccaggaaataagtcacttgatctcgtgtcaacctacggcattaaaagccgtgagattacaggcct tagtaccactgtacccagagagggaggataggagagatcgacttgataaactagagagagaacgagtagagtcattatta gaggatgcccagggtttacttgtcaacagaattcattga |
|
Protein
| Protein ID | pfu_aug1.0_3506.1_66716.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3506.1_66716.t1 SLPPIDDDGAGGKFKPRNRKKIEAQDLKKLAPQQRSRYLAYEDPPKEVNEAMGATKKRLAEEKKRLERANAPPSEEEVDE REKHAKLIGQLKAAEARNRLRIMRLRYQANRAQEISHLISCQPTALKAVRLQALVPLYPEREDRRDRLDKLERERVESLL EDAQGLLVNRIH |
|