Gene
| Gene Model ID | pfu_aug1.0_3510.1_08638 |
|---|---|
| Locus | scaffold3510.1 : 22641 ... 41285 : - |
| To GenomeBrowser | scaffold3510.1:22641..41285 |
| Genes list of scaffold | scaffold3510.1 |
| Synonym | pfu_aug2.0_386.1_20708 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3510.1_08638.t1 | 1 | 1 | DUF3546 | 3 | 86 | 4.7e-29 | 100.6 | 1.3e-32 | 4.7e-29 | 100.6 |
| pfu_aug1.0_3510.1_08638.t1 | 2 | 1 | ARS2 | 407 | 437 | 1.1e-20 | 74.8 | 7.0e-09 | 2.6e-05 | 24.5 |
| pfu_aug1.0_3510.1_08638.t1 | 2 | 2 | ARS2 | 456 | 554 | 1.1e-20 | 74.8 | 9.8e-19 | 3.6e-15 | 56.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3510.1_08638.t1 | gi|241753439|ref|XP_002412526.1| | arsenite-resistance protein, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 3 |
| adductorMuscle | 1 |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_3510.1_08638.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3510.1_08638.t1 atgttgacattcaagcagtttctgggtcaacaggaagacaatatcagcgatcaagatgcaattaaaaaatataacgagta taaggaagaatttaaacgtcaacagatcaatgagtttttcctagcacacaaggaagaggaatggtttaagaccaagtacc atccagaggagtgtagtaagagacaagaggaggtaactgcagccctccagaaacgttgtaacgttttcttagatctgttg gagtccggcagaatcgagtatgcaccagtacaaaagaaatctccgaagaaaggaaagaagaggcatcgtgataagacaga gtacagttacgagagtggatcagaatctgagagtgtatcggggtcagactctgattcagagccagcaccccctggactgg aggaaaatgctggagccccgggggaggagggagaggaagaaatagaggagggtgaggaggaggatgatgatgatgaagat gaagacgatgataaagatgttgatactaaagaaaccaaggaagagaagattgaggagacaagctcatcaaaaccacgatg tttacataaaacctgctccatcttcctgaggaacctagctcctaccataaccaaacaggaggtggaagctatgtgtaagc ggtaccctggttttctgagagttgccctccaggatcctcagtctgagagacgattcttcagacggggatgggtgacgttt gaaagggaagtcaatatcaaagagatctgctggaaccttaataatatcaggcttcgtgattgtgaactgggagcaacatt gaacagagaacttaagcagcgtatacgacctgtcaacggaatatcagcacacaaacagatcttacgatctgacgtcaaac tagcggcaaaaataatacagaatctggacaataaatggggcatctgggaagagccggaagaagagaaaaaagataaaacc aaggagctaacattcagtctgatatccaggaaccctgtacttaaaaacatcacagattatcttgttgaggaagggagtta cgaagaggaagaattgctgggtgaatctatggaagagaaggagaaagagaccaataacgaggtgacagtcgagagagatg aaggcatgatcaaggcattagacagaatggtcctgtacctgaggattgtccactctgtagattattatagtgctaacgag taccctaacgaagacgagatgccgcataggtgtggtataatgcattgtagaggaataccacccaccacaaaaattacaca acaggatgtgttacatgcaatcaggacgctgacctcccccccccccctccccgggcacctgatttcacttcggcatgtta ttctttccgaagtttctttctttaacaactatttaatggacccaaaaagaccctccctgccggaaaatcctaaaaataaa cagcagcagaagccggagagacacaaaggggatcacttctctggctctggggggatgggattccaaggtcaccaacagca aggcatgatgggaggttacaatcaaccaagaccacacatgatgggatatagtggtggtcattatggatcccacggtggat tcggtggtggacgtgattactaccctgagtataatagacgatcaggaggcgggtatcccagacatttcagatcttatgtg aagaggaactctgaccaccgtcgctctgatccgagaggtttgatcgagtacagagatctggacgcacctgatgatggaga catattttga |
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Protein
| Protein ID | pfu_aug1.0_3510.1_08638.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3510.1_08638.t1 MLTFKQFLGQQEDNISDQDAIKKYNEYKEEFKRQQINEFFLAHKEEEWFKTKYHPEECSKRQEEVTAALQKRCNVFLDLL ESGRIEYAPVQKKSPKKGKKRHRDKTEYSYESGSESESVSGSDSDSEPAPPGLEENAGAPGEEGEEEIEEGEEEDDDDED EDDDKDVDTKETKEEKIEETSSSKPRCLHKTCSIFLRNLAPTITKQEVEAMCKRYPGFLRVALQDPQSERRFFRRGWVTF EREVNIKEICWNLNNIRLRDCELGATLNRELKQRIRPVNGISAHKQILRSDVKLAAKIIQNLDNKWGIWEEPEEEKKDKT KELTFSLISRNPVLKNITDYLVEEGSYEEEELLGESMEEKEKETNNEVTVERDEGMIKALDRMVLYLRIVHSVDYYSANE YPNEDEMPHRCGIMHCRGIPPTTKITQQDVLHAIRTLTSPPPLPGHLISLRHVILSEVSFFNNYLMDPKRPSLPENPKNK QQQKPERHKGDHFSGSGGMGFQGHQQQGMMGGYNQPRPHMMGYSGGHYGSHGGFGGGRDYYPEYNRRSGGGYPRHFRSYV KRNSDHRRSDPRGLIEYRDLDAPDDGDIF |
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