Gene
| Gene Model ID | pfu_aug1.0_3510.1_08641 |
|---|---|
| Locus | scaffold3510.1 : 71477 ... 75735 : - |
| To GenomeBrowser | scaffold3510.1:71477..75735 |
| Genes list of scaffold | scaffold3510.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3510.1_08641.t1 | 1 | 1 | Tctex-1 | 79 | 181 | 1.8e-18 | 66.2 | 4.1e-22 | 3.1e-18 | 65.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3510.1_08641.t1 | gi|156396390|ref|XP_001637376.1| | predicted protein [Nematostella vectensis] | 4.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3510.1_08641.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3510.1_08641.t1 atgcaagcttcttcaaagtttagtgtagatggcgacactgaagatgacgacagatctgtcgtgacgtcactttcccgcaa tacgacaggacccatcatgtctagaacaacaaagaagacgcgtccgtggaaacttagagccgggtctgataatcccagtg acacaattagagaagaagcattaaagacctacgaaccgacgtacagaatggagccttatcagacatttagtcactcaaaa acaaagaaagtaatcgaggagacaatatcgacttgtctgaacggcttcaagtatccatcagaaggtaactatgccgccgc ttcagctatgaccaagaagataccggaggcaatagttcaaaaggtcaaggccttggagattgaccgatataaaatcgtgt gctttgtgacactgggtagtatgaataaccagtccctcagtgtggctagcaggtgtatgtgggataacagtctggatacc agcgtgtcatacacatacaagaaagataacttctactgtagtgctgtggtttttggtttatataaagagtaa |
|
Protein
| Protein ID | pfu_aug1.0_3510.1_08641.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3510.1_08641.t1 MQASSKFSVDGDTEDDDRSVVTSLSRNTTGPIMSRTTKKTRPWKLRAGSDNPSDTIREEALKTYEPTYRMEPYQTFSHSK TKKVIEETISTCLNGFKYPSEGNYAAASAMTKKIPEAIVQKVKALEIDRYKIVCFVTLGSMNNQSLSVASRCMWDNSLDT SVSYTYKKDNFYCSAVVFGLYKE |
|