Gene
| Gene Model ID | pfu_aug1.0_35118.1_12199 |
|---|---|
| Locus | scaffold35118.1 : 1 ... 6355 : - |
| To GenomeBrowser | scaffold35118.1:1..6355 |
| Genes list of scaffold | scaffold35118.1 |
| Synonym | pfu_aug2.0_1232.1_08272 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_35118.1_12199.t1 | 2 | 1 | SDF | 1 | 23 | 0.0 | 182.0 | 0.004 | 59.0 | 2.2 |
| pfu_aug1.0_35118.1_12199.t1 | 2 | 2 | SDF | 29 | 158 | 0.0 | 182.0 | 0.0 | 0.0 | 178.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_35118.1_12199.t1 | gi|148222124|ref|NP_001083306.1| | solute carrier family 1 (glial high affinity glutamate transporter), member 3 [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_35118.1_12199.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35118.1_12199.t1 atgggcgacaaaggaaaaccactcatggacttttgcaactgcgtgttcgaatgtaccatgaaactctttatcgtgtttat ttgctctgctacaatgccagtcacgctccattgcctggaacatgtgaaccatatcgatccgcgggtgtgcagctttgtta ttcccgtgggggccactatcaacatggacggtaccgccctttacgaagctgtggctgctctattcatcgcccaagtcaac aacgccaatatgtcgtttgggaatatcataactataagcatcactgccacggcagcttcaataggagcagctggcgtccc tcaggcggggcttgttaccatggttatcgtattatcagctgttggactgcccatcgaagatgtcacactcattctcgtgg ttgattggttcttagatcgcttccgtacacttaccaacgttactggtgacagtctcggtgcagggatagtccattacctt tctctgaaagagttacctcccttaaataaagaacaggaaatggaagaaaagatgacgaacaacgtccttgatcctagaaa ggagaatgacgccatgacggcagtgtga |
|
Protein
| Protein ID | pfu_aug1.0_35118.1_12199.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35118.1_12199.t1 MGDKGKPLMDFCNCVFECTMKLFIVFICSATMPVTLHCLEHVNHIDPRVCSFVIPVGATINMDGTALYEAVAALFIAQVN NANMSFGNIITISITATAASIGAAGVPQAGLVTMVIVLSAVGLPIEDVTLILVVDWFLDRFRTLTNVTGDSLGAGIVHYL SLKELPPLNKEQEMEEKMTNNVLDPRKENDAMTAV |
|