Gene
Gene Model ID | pfu_aug1.0_3518.1_44676 |
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Locus | scaffold3518.1 : 73586 ... 80468 : + |
To GenomeBrowser | scaffold3518.1:73586..80468 |
Genes list of scaffold | scaffold3518.1 |
Synonym | NA |
Manual annotation
Study field | Environmental Response |
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Gene name | similar to leukotriene B4 receptor |
Description | BLASTP top hit to XP_001198784.1 [Strongylocentrotus purpuratus] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3518.1_44676.t1 | 1 | 1 | 7tm_1 | 4 | 315 | 1.3e-13 | 50.6 | 1.4e-17 | 2.1e-13 | 50.0 |
Transcript
Transcript ID | pfu_aug1.0_3518.1_44676.t1 |
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Definition | - |
>pfu_aug1.0_3518.1_44676.t1 atgatacacctcacatacacatttgtgcatgcttctttgacatttcttctggcgatagcagttcaaaggtatttcatcat atgtcgtcccgttgggtacagattttctgtcttgacttgtcgtttggtattagtttttatagtaatatcatctggaattg tcgtctcaccctcttcaatacggaatgggacattcgacgtcaaaaacaccagatataatgtgaccgggatgcgatgcaga tattccccagaatttttggtcagatcgaatatattccgtaaggtattcggaacaattcctgtgattgaagtactcataat ttccgtgctgtatctgaaaatatggaggtatgttccgaataaaaaggcaaaaaagaacttgaaaaagagtcgtaaactgc cgataaatagaaaggaaaacggaaatttgatgactgtcacaaattgttcaacgcctaaatttgatcgtcaggatgaattt aaaagtattgaagatatttacatctcgtcagaaaatagtatgagacgggattccggacaaggatcttttccagttgatga aaacgagcacagatttacaattcttccaaagacaattaccgatcttacatctatatcacaggaagaatcttctaaaggat ttgatagtgataagattgaacgcacggcttttacaatttccgatgttagaattgagaaatctcatggatgcttcgcttat tttcttcagtgtatttacagtaggggctcttttagtaaaacaacgaagattttcatcatcatttcactttttggtttcgt ctcattttttccaactaccatactttctagttatgaaacagaagattacctgtttttggacaagctatctcccacaatgt atgttttttgttgtattataagattgttttacctttttaaccactcggccaacccattcatttatggaatactagacaca aaattccgaaatgaaatgttaactctgttacgataa |
Protein
Protein ID | pfu_aug1.0_3518.1_44676.t1 |
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Definition | - |
>pfu_aug1.0_3518.1_44676.t1 MIHLTYTFVHASLTFLLAIAVQRYFIICRPVGYRFSVLTCRLVLVFIVISSGIVVSPSSIRNGTFDVKNTRYNVTGMRCR YSPEFLVRSNIFRKVFGTIPVIEVLIISVLYLKIWRYVPNKKAKKNLKKSRKLPINRKENGNLMTVTNCSTPKFDRQDEF KSIEDIYISSENSMRRDSGQGSFPVDENEHRFTILPKTITDLTSISQEESSKGFDSDKIERTAFTISDVRIEKSHGCFAY FLQCIYSRGSFSKTTKIFIIISLFGFVSFFPTTILSSYETEDYLFLDKLSPTMYVFCCIIRLFYLFNHSANPFIYGILDT KFRNEMLTLLR |