Gene
| Gene Model ID | pfu_aug1.0_35193.1_48184 |
|---|---|
| Locus | scaffold35193.1 : 1 ... 11934 : + |
| To GenomeBrowser | scaffold35193.1:1..11934 |
| Genes list of scaffold | scaffold35193.1 |
| Synonym | pfu_aug2.0_25.1_16734 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_35193.1_48184.t1 | 5 | 1 | LRR_4 | 55 | 93 | 8.0e-15 | 54.0 | 0.00052 | 1.1 | 8.9 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 1 | LRR_1 | 56 | 70 | 1.2e-09 | 36.8 | 0.036 | 77.0 | 3.9 |
| pfu_aug1.0_35193.1_48184.t1 | 6 | 1 | LRR_8 | 80 | 112 | 6.0e-24 | 83.5 | 7.9e-08 | 0.00017 | 21.2 |
| pfu_aug1.0_35193.1_48184.t1 | 6 | 2 | LRR_8 | 80 | 113 | 6.0e-24 | 83.5 | 7.9e-08 | 0.00017 | 21.2 |
| pfu_aug1.0_35193.1_48184.t1 | 5 | 2 | LRR_4 | 80 | 113 | 8.0e-15 | 54.0 | 0.00045 | 0.95 | 9.1 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 2 | LRR_1 | 80 | 96 | 1.2e-09 | 36.8 | 0.022 | 48.0 | 4.5 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 3 | LRR_1 | 103 | 121 | 1.2e-09 | 36.8 | 0.0029 | 6.1 | 7.2 |
| pfu_aug1.0_35193.1_48184.t1 | 6 | 3 | LRR_8 | 161 | 219 | 6.0e-24 | 83.5 | 4.3e-05 | 0.092 | 12.5 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 4 | LRR_1 | 283 | 295 | 1.2e-09 | 36.8 | 0.98 | 2100.0 | -0.5 |
| pfu_aug1.0_35193.1_48184.t1 | 6 | 4 | LRR_8 | 298 | 305 | 6.0e-24 | 83.5 | 0.93 | 2000.0 | -1.4 |
| pfu_aug1.0_35193.1_48184.t1 | 5 | 3 | LRR_4 | 326 | 360 | 8.0e-15 | 54.0 | 0.00022 | 0.46 | 10.1 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 5 | LRR_1 | 326 | 343 | 1.2e-09 | 36.8 | 0.1 | 210.0 | 2.5 |
| pfu_aug1.0_35193.1_48184.t1 | 6 | 5 | LRR_8 | 329 | 362 | 6.0e-24 | 83.5 | 8.6e-06 | 0.018 | 14.7 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 6 | LRR_1 | 349 | 362 | 1.2e-09 | 36.8 | 0.0036 | 7.5 | 7.0 |
| pfu_aug1.0_35193.1_48184.t1 | 6 | 6 | LRR_8 | 379 | 436 | 6.0e-24 | 83.5 | 2.0e-15 | 4.3e-12 | 45.6 |
| pfu_aug1.0_35193.1_48184.t1 | 5 | 4 | LRR_4 | 379 | 409 | 8.0e-15 | 54.0 | 2.2e-05 | 0.048 | 13.3 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 7 | LRR_1 | 379 | 400 | 1.2e-09 | 36.8 | 0.00034 | 0.71 | 10.1 |
| pfu_aug1.0_35193.1_48184.t1 | 5 | 5 | LRR_4 | 402 | 442 | 8.0e-15 | 54.0 | 6.6e-12 | 1.4e-08 | 34.1 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 8 | LRR_1 | 402 | 422 | 1.2e-09 | 36.8 | 0.0085 | 18.0 | 5.8 |
| pfu_aug1.0_35193.1_48184.t1 | 9 | 9 | LRR_1 | 425 | 441 | 1.2e-09 | 36.8 | 0.0014 | 2.9 | 8.2 |
| pfu_aug1.0_35193.1_48184.t1 | 1 | 1 | TIR | 587 | 722 | 6.1e-18 | 64.6 | 7.1e-21 | 1.5e-17 | 63.3 |
| pfu_aug1.0_35193.1_48184.t1 | 1 | 1 | TIR_2 | 588 | 686 | 6.8e-09 | 35.8 | 5.8e-12 | 1.2e-08 | 34.9 |
Transcript
| Transcript ID | pfu_aug1.0_35193.1_48184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35193.1_48184.t1 tttgtgcttcttcttgttcatacttgaatttccctgtgttgaaacgacctatccagaacagtgtagtagtaacaagcaat gtacgtgtacaagacttcatgatggttactacaaagcagattgctctagaaaggatctaacagatattcctttattcgat gaaaatgttgttgttattgatatgagcggaaatgaaaaattgacaaagatagcaggaattatcaaattgccgattcttct taagaatttagatattaattcctgtaatctacactatatcgaacttggtgcgttagagaaacagaaaaatcttgaatatc ttgatatttcatggaacaaggcactgactctaaatgttctaccaaacgtgaccaatgatttaagtggttcaaatataaaa atattaaaattcaacgcgatccaatgtccgaatggtgctggaataactcttagatatgaacatttgtgtcgattgcaaaa aagttcgctcaaagaaatagagatggccaagaatagaatagatatggtcgagcaatttacgcttcgtagtctaccaaaat ccttagtaaaaatgtcggctggattcaacagattacgctttggaccttacttcatggaatttagttccctcgaaagcatt cgatatgtcaatttaagcgatatgtacgctatttctagtccttttcgagatccttggataatgtgtgatgattctaagga tgaaacagtcgacgaatatctagtccctaaaggactttcaccctgcccggaaatgaataagatcgagaataccgcattac ttgacaacatagttatcatgtatatgccgccaaaattagagaccatgatcaggaataatttcatcgtatatttgcctgat aaatggaataacctaattttgaaatacaactctttgaaaagaacggtttcacgccataattttctacagtttcttagagg aactgattattctgggaaacttgaagaagccgatttttcttataacttcataagggaaattgatgatttattttttacaa caagcaatttgaccatactagatttgtcatataatttacttggtcactttttttctaccgaaagatccgttagactatta catcgtcaacaatttttggaaattctgaaattatcaaataacaaactgaataaaattcattatgaaatgtttgaagggct ttcaagacttcaagtattaaatttaagtgacactgaactaaaaaatgtacgcttcacgtttcgtggtttgactcaactat catctttagacctttccaacaacaggattcgagctttttctgatttaaacatgcatgaattagacaagctgagcgaagga attccattatctataaacttgacctggaacgattttttatgcgcatgtgagactctcgaatttttacaatggatgcaaag gaagcaggcaataaatagcagaataacattgacaaagtttgaaaactacacgtgttcctttgcagattcgacaaaaagaa gttttcatgatatatctaagataatattagatcttaagttaaaatgctcttcaaaaagcacgatattcatcataagtggg tttgtaatctttgcttttataattattgtcatatcgggaattttgtaccgatatcgatggaaattgagatacatatacta catgactcgccggagtctacggggatatttcttacttaaggatcatgatggaagacaaacgaaatgttacgaattcgacg cctttataagttttgccgatgaggatgccacatttgcctatagattgttgaaatccaaagttcaaagcaagtatccgtca gcaaaattatgctatcattacgagcaattcatagccggaactgatgttgctgaaaacattgtaaatgcagtaaattgtag cagaagaacaatatgtgttttgacagataatttcctcgcgtctgagtggtgcatatacgagtttaagatggcaaatttgg aaaagatctacagacgtggtgatcagaactctcttattatcctaatgctcggaagtattcatgcagatcgagtgccagca gacataatgacgttcctgaaatctaggtcttacttagaagttccagatgacatggacgattctgatgttttctgggataa tatcataagttcagttatggaggatggttag |
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Protein
| Protein ID | pfu_aug1.0_35193.1_48184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_35193.1_48184.t1 LCFFLFILEFPCVETTYPEQCSSNKQCTCTRLHDGYYKADCSRKDLTDIPLFDENVVVIDMSGNEKLTKIAGIIKLPILL KNLDINSCNLHYIELGALEKQKNLEYLDISWNKALTLNVLPNVTNDLSGSNIKILKFNAIQCPNGAGITLRYEHLCRLQK SSLKEIEMAKNRIDMVEQFTLRSLPKSLVKMSAGFNRLRFGPYFMEFSSLESIRYVNLSDMYAISSPFRDPWIMCDDSKD ETVDEYLVPKGLSPCPEMNKIENTALLDNIVIMYMPPKLETMIRNNFIVYLPDKWNNLILKYNSLKRTVSRHNFLQFLRG TDYSGKLEEADFSYNFIREIDDLFFTTSNLTILDLSYNLLGHFFSTERSVRLLHRQQFLEILKLSNNKLNKIHYEMFEGL SRLQVLNLSDTELKNVRFTFRGLTQLSSLDLSNNRIRAFSDLNMHELDKLSEGIPLSINLTWNDFLCACETLEFLQWMQR KQAINSRITLTKFENYTCSFADSTKRSFHDISKIILDLKLKCSSKSTIFIISGFVIFAFIIIVISGILYRYRWKLRYIYY MTRRSLRGYFLLKDHDGRQTKCYEFDAFISFADEDATFAYRLLKSKVQSKYPSAKLCYHYEQFIAGTDVAENIVNAVNCS RRTICVLTDNFLASEWCIYEFKMANLEKIYRRGDQNSLIILMLGSIHADRVPADIMTFLKSRSYLEVPDDMDDSDVFWDN IISSVMEDG |
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