Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3525.1_23341
Locus scaffold3525.1 : 6074 ... 26325 : -
To GenomeBrowser scaffold3525.1:6074..26325
Genes list of scaffold scaffold3525.1
Synonym pfu_aug2.0_3.1_10035

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1
mantleEdge 1
mantlePallium 1

Transcript
Transcript IDpfu_aug1.0_3525.1_23341.t1
Definition-
>pfu_aug1.0_3525.1_23341.t1
atggacataggtaatatgagtcatacttatgccctttgccgtttggagctcttaaaaaaagtttcccgcgaggggttcga
caaacccgtcacaatggagaatgctatatcatcatcatctttaaacatagtgatagagtatgttaaagaaaagaagcata
tgtttccgacccgtacaacaattgaagacccttttaagcaatggttagttaatggtggacaatgtggtgtatgtggtgat
ccctgggatgaactccgtacaaacgaaatcctagaacagtttcctgaaatattcatggtagacaatatcgcgaaacagaa
gaggataaagctgtttgcggagttaccatcaaatggacgtggttacatagaggttcgcctgtgtgaatccaaaaccaatc
agctgtcacaggaatgtttcgacgagaatctgcttttcattgaggaggcaaatgccaacagatacaaagttgggaaggag
acacaagtcgtcctgacgttattggtaccggagaccatcatctgtgagaaatgtgtactacagtggaaatatgttaaagt
tccttcaaatgtccaacctcctcaagctaacaataatgtggctcaaaattctatgcatcttatgacacagcaggttaata
ataacatgaatcagaatgcaccgacacctcaatcaaactacatgggaataaccgatattacaaaggttctgaagccctcg
gctgctccttatacgggaggcaatccacctcaacaacagacatcaaaccaaaatactcagcaaacctcccggcaaggttc
ttctatgattattcagtcccaaactcaagcttctagcagcactcaaggtcaggttaatcaagctcacagcaatacaatgc
acagtgcatctcatacctcacaacaccaagcgataaatcagcaacaaatgacgaatcagcagcaagtaatgaatcagcaa
caaatgacgaatcagcaacaagtaatgaatcagcaacaaggtatgaatcagcaacaaatgacgaatcagcaacaagtaat
gaatcagcagcaaatgacgaatcagcaacaagtaatgaatcagcaacaaatgacgaatcagcaacaaatgacgaatcagc
aacaagtaatgaatcagcaacaaatgatgaatcagcaacaaatgatgaatcagcaacaaatgacaaatcagcaacaggta
atgcatcagcaacagggcatgaaccagcaccaaggaatgaaccagcaccaaggaatgaatcagcaatcaacatcaaatat
acataccgctatcaagcatcacggtactaataagcacactccgtcacttttagaaaatatggaaaattcattgaaggtta
tacaaagtatggacgggaaagagagaaatgctctttatgttgtcaaatcatcaaaggacgttcctaaagttattcaaact
ttggaaatgaataaaacaaaaaagacaaaggaagaagtagttgctccggttgaacaagcaacgccggcagaacagtatcc
aggcgggaacgaaaacatgctgaacattaagtacgatactggattcagtggaggtagaaatatcccattatatgttgtcc
agacagagccaaaacaagtacaggcaacaaataccttaccacaaacaatgaacaatttaccagcatcacaaaacgtcctg
tcaaagactgtcagcaagtccagtatgattcctcctaacccaccaccaccaaaacaagtatccccaactcttacggagcc
atctaatgttcaaaatcagaatgttatatctaacactgtagtaaatactcagaagtcgaatatactatatgataaaccag
tggagccgattcctaaaggtgtaaaactagccggtattcctgatcctataagctcaaatattgtaattccgaaagcaagt
caagtctctgttgcccaaaataaatatccaacagttcaaccatcccctaaaagtcaggtcatcgcaggatcaagttctgt
tggtatggaaatgaaaggaccaactcagatgacgtcgttggatgctatcctatggggagtcaatgccggtaaacaagcaa
ccggtaccagtatgcccctaccgaaacaacctttcccagtttcatcgttttcaacaaccaataataatcccaaatcggag
gtaaaattttcggcaagacgtcctgtatttaagccaggcaaaaaggccgtcttctctttcggctatcgaaacaaacaacg
aacattctcgggaaaggaaccgtccgtatttaaaatgccacgggcacaagacaatgcagctcaaaaccaaatcaatcaat
tagagcccaagacagccatgaagtctatagaatcgttcaatacagcaaataaagacttgatgtcatctcaggatcccagg
ttcggtagttccagttcgagtatggtaagtaatgcggtcatgaacatgccaaatgtaaatatgatgcctccacaagctca
ggttgtcaacagaccaccttcaagttttatgaataacgcgggaatgacgggcgctgtagtaatgaccggatttcaaggta
ctgggggtagatcaactatgactggcaacgcacagacggaagcagctggtgtcaatatggtatcatcgggtctttctcaa
agccaatcaaaacaagtgcaagtcttaacatcaagtttgtcggcaagtggacaatacagtatgcaagacaaacaggagca
agctatgatgggaggaaatatcaatccacctaacttactgcagtcgtccgtcattgtaccggaaaaaccaagcatgcccg
cagatggccgagttgaccaggcgggtatgatggtatcagaaccaatgatgaatcagatgtcatctggaagcagtgcgcat
ctcagttcttctaacacggtaggaagacagacccataagtttttcgatggcaatcctgaaatagtggttagtcattctca
aggacaatcgagccagtctaacccagtacacaagtccaaggtgctgtggtcatcagctgtttctaaaaatcagggaccta
atattatctatagagaccaatccaatcctccaacaaatcctacaatgacacctggtgttactcaatctaaatcaccatcg
tacccgtccttttcattcactggtatacagagcacagctatggcaaccaaagtaccgctttttaacgcagcaggtacagc
tggaccgggtcttctagaaacaaaagactatttctctagaacacctatacaaaaagtgatcaacatgaggagaccatctt
ttagctttgggtcgaaatcaagaaatcatagcccaaaaatttcgtacataaagagttttagtgtgcaacaaaatcagaaa
cagacaaatgcaccgcttaatatgacccctaccggtaatacgatgaaaccaaccaccggccagtggaaccgtgtcagatg
a

Protein
Protein IDpfu_aug1.0_3525.1_23341.t1
Definition-
>pfu_aug1.0_3525.1_23341.t1
MDIGNMSHTYALCRLELLKKVSREGFDKPVTMENAISSSSLNIVIEYVKEKKHMFPTRTTIEDPFKQWLVNGGQCGVCGD
PWDELRTNEILEQFPEIFMVDNIAKQKRIKLFAELPSNGRGYIEVRLCESKTNQLSQECFDENLLFIEEANANRYKVGKE
TQVVLTLLVPETIICEKCVLQWKYVKVPSNVQPPQANNNVAQNSMHLMTQQVNNNMNQNAPTPQSNYMGITDITKVLKPS
AAPYTGGNPPQQQTSNQNTQQTSRQGSSMIIQSQTQASSSTQGQVNQAHSNTMHSASHTSQHQAINQQQMTNQQQVMNQQ
QMTNQQQVMNQQQGMNQQQMTNQQQVMNQQQMTNQQQVMNQQQMTNQQQMTNQQQVMNQQQMMNQQQMMNQQQMTNQQQV
MHQQQGMNQHQGMNQHQGMNQQSTSNIHTAIKHHGTNKHTPSLLENMENSLKVIQSMDGKERNALYVVKSSKDVPKVIQT
LEMNKTKKTKEEVVAPVEQATPAEQYPGGNENMLNIKYDTGFSGGRNIPLYVVQTEPKQVQATNTLPQTMNNLPASQNVL
SKTVSKSSMIPPNPPPPKQVSPTLTEPSNVQNQNVISNTVVNTQKSNILYDKPVEPIPKGVKLAGIPDPISSNIVIPKAS
QVSVAQNKYPTVQPSPKSQVIAGSSSVGMEMKGPTQMTSLDAILWGVNAGKQATGTSMPLPKQPFPVSSFSTTNNNPKSE
VKFSARRPVFKPGKKAVFSFGYRNKQRTFSGKEPSVFKMPRAQDNAAQNQINQLEPKTAMKSIESFNTANKDLMSSQDPR
FGSSSSSMVSNAVMNMPNVNMMPPQAQVVNRPPSSFMNNAGMTGAVVMTGFQGTGGRSTMTGNAQTEAAGVNMVSSGLSQ
SQSKQVQVLTSSLSASGQYSMQDKQEQAMMGGNINPPNLLQSSVIVPEKPSMPADGRVDQAGMMVSEPMMNQMSSGSSAH
LSSSNTVGRQTHKFFDGNPEIVVSHSQGQSSQSNPVHKSKVLWSSAVSKNQGPNIIYRDQSNPPTNPTMTPGVTQSKSPS
YPSFSFTGIQSTAMATKVPLFNAAGTAGPGLLETKDYFSRTPIQKVINMRRPSFSFGSKSRNHSPKISYIKSFSVQQNQK
QTNAPLNMTPTGNTMKPTTGQWNRVR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495